Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01348 ATGGCCATCCCCTATCCCCATTTCATTGCCACCGAGAAGGCCGCCATGGACGCCGGCCTCCTCCTCCCCTCCTCCTCCCCATCCGTCATCTTCACTCAAGACGACCTCAAGAAGATCGCCGCCTACAAGGCGGTCGAGTACGTCGAATCCGGCATGGTCCTCGGCCTAGGCACTGGCTCCACCGCCAAGCACGCCGTCGACCGCATCGGCGAGCTTCTCCGCCAGGGTAAACTCAAGGACATCGTCGGAATTCCCACCTCCAAGAAAACCCACGAACAAGCACTCTCCCTCGGGATCCCCCTCTCCGATCTCGACTCCCACCCCGTCGTCGATCTGGCCATCGACGGTGCCGACGAGGTCGACCCTTTTCTCAACCTCGTCAAGGGTCGCGGTGGCTCCCTCCTGAGGGAGAAGATGGTGGAGAGCGCATGCAAGAAGTTTATTGTTATCGTTGATGAGTCCAAGCTCGTGAACTATTTGGGGGGGAGTCGATTGGCCATGCCCGTTGAGGTTATTCAGTTTTGTTGGAGGTTCACTGCTGAGAGGTTGCGCAAGCTGTTTGAGGAGGCCGGGTGTGTTGCCAAGCTTAGGACTTTCGGGGAGAAGGAGGAGCCCTTTGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCGAGAGGAGTATTGGGGATTTGAAGGCTGCCAGTGACGCAATTCTGCAGCTTGCTGGGGTGGTAGAGCATGGTATGTTTCTGGATATGGCTACCACTGTTATCGTGGCAGGGGAGCTTGGCTTGACAGTGAAGAATAAGTAG 798 0.5639 MAIPYPHFIATEKAAMDAGLLLPSSSPSVIFTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSKKTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVNYLGGSRLAMPVEVIQFCWRFTAERLRKLFEEAGCVAKLRTFGEKEEPFVTDNGNFIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01348 265 Gene3D - 36 257 - -
Spst10g01348 265 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 24 264 - -
Spst10g01348 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 32 216 IPR037171 -
Spst10g01348 265 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 82 257 IPR004788 GO:0004751|GO:0009052
Spst10g01348 265 Gene3D - 159 243 - -
Spst10g01348 265 FunFam Ribose-5-phosphate isomerase A 36 171 - -
Spst10g01348 265 Hamap Ribose-5-phosphate isomerase A [rpiA]. 33 263 IPR020672 GO:0004751|GO:0009052
Spst10g01348 265 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 165 246 - -
Spst10g01348 265 NCBIfam ribose 5-phosphate isomerase A 36 259 IPR004788 GO:0004751|GO:0009052
Spst10g01348 265 CDD RPI_A 36 256 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01348 Spst-Chr10 13970558 13971355 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01348 10 13970558 13971355 Spst10g01348 10 13970558 13971355 ECH