Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01341 ATGGGAGTTGATAGGAAATGGCTTTTCACTCTATTCAGTGCAGCATTGCTGACTCTCATGGTTCTATTGATGTCTTCTTTCTCTGCCTTTAGTTCCCCAAAAGCTTTCCCTTCCCTTGTTCAGCATGGTTCTCATTACCCTCCAGCTTTTGCATACTTTATCTCTGGTGGACACAAAGACAAGGACCAGATCTTGCGTTTGTTGTTGGCAGTTTACCATCCTAGGAATAGGTACCTCCTCCATCTTGGGAGGGATGCTAGGGATGAGGAGAGGCAGGCCTTGATCGCAGCCGTAAGGACTGTGCCGGTGATTCGCGCTTTTGGGAACGTTGATGTGGTTGGAAAGGCTGATTATGTCACCTACTTGGGGTCCTCCAATGTGGCCATCGCTCTCCGGGCTGCAGCTATTTTGCTCAAATTGGATAGTGGCTGGAATTGGTTCATCCATTTGAGTGCTCGTGATTATCCTCTCATCACACAGGATGATCTGTCCCACGTTTTCTCTTCTGTTAGGAGAGACCTGAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGACCGATAGATTTCAGCCTATTGTAGTTGACCCGGGGTTATATTTAGCAAGAAAAAGTCAAATTTTTCAAGCTACGGAAAAGAGGGCAACGCCTAATGCATTCAAACTTTTCACAGGTTCACCATGGGTCATCTTGAGCCGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGGACCCTACTTATGTATTTTACAAATGTGAAGTTATCTCAAGAAGGGTACTTTCACTCGGTTATTTGCAATGCGCCAGAGTTCAAGAACACAACAGTAAATGGGGACTTACGATTTATGATCTGGGACAATCCTCCGAAGATGGAACCACACTTCCTTAACACTTCCGTTTACAATGAGATGGTAGAAAGTGGAGCTGCTTTTGCAAGACAGTTTCAACCTAATAATCCTGTGTTGGACATGATTGATGAGAAGATCCTCCATCGTGGTAGCCATCGAGCTACTCCAGGAGAGTGGTGCACCGGGCGGAGGAGTTGGTGGATGGATCCCTGCTCCGAATGGGGTGATGTCAATATTGTGAAACCAAGTTCTCAGGCTAAGAAGCTTGAAGGGTCCGTTTCTAACCTTCTTGATGGCTGGAACTCACAGGCCAATCAGTGCCGGTGA 1191 0.4635 MGVDRKWLFTLFSAALLTLMVLLMSSFSAFSSPKAFPSLVQHGSHYPPAFAYFISGGHKDKDQILRLLLAVYHPRNRYLLHLGRDARDEERQALIAAVRTVPVIRAFGNVDVVGKADYVTYLGSSNVAIALRAAAILLKLDSGWNWFIHLSARDYPLITQDDLSHVFSSVRRDLNFIDHTGDLGWKETDRFQPIVVDPGLYLARKSQIFQATEKRATPNAFKLFTGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRFMIWDNPPKMEPHFLNTSVYNEMVESGAAFARQFQPNNPVLDMIDEKILHRGSHRATPGEWCTGRRSWWMDPCSEWGDVNIVKPSSQAKKLEGSVSNLLDGWNSQANQCR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01341 396 PANTHER GLYCOSYLTRANSFERASE 4 394 IPR044610 GO:0015020
Spst10g01341 396 Pfam Core-2/I-Branching enzyme 50 309 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01341 Spst-Chr10 13908287 13912799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01341 1 396 Glycosyltransferase AT1G71070 67.172 0.0 569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01341 10 13908287 13912799 Spst10g01341 10 13908287 13912799 ECH