Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01331 ATGGATGGAGAAGCCGAAACCTTTACATCCAAATTGCTTGGTGCCAATTCAAGGCTCTACTCGGCATCAAATTACTTGAAGATCAGATCCTCTTCTTCTGAAGGATACGATATAATACAATACAAATCCCACCTCATCTTAGCCTGTACTAACCCACACAATGCTGATCTCACATCACACACTCTCACCCTCGCCACTCTACATCAGATAACCCATGCCATGCCTCGGACAATGGTCGCAAAGCAAGGGTTTTGGACTGTCACCAAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCTGAACAGCAGAAAGTAACGGTTTCAGGTAGTGTGGATTCTGCAACCTTGATCAAGAAGCTGGTCAGAGCGGGTAAATATGCCGAGCTCTGGTGTCAGAAAAATCAGAACCAAAAGCAGAAGAGCAACAATGCGAAGGATGACAAGAACAAAGGACAAAAGCAAGCACTTGTCAAGGGACTTGAGGCCTTCAAAAACCAGCAGAAGTTTCCTGCATTTAGTTCTGAGGAGGATGAATACTACTCAGAATATGAAGACGACGACGATGAGGAAGATGAAGAAATGCGCTTTCTCAGGGAGAAAGCCAATCAACTGCAGATGCTCAAGCAGCAAGCGGCTAATGCAAATAATGTGAGGAAAAGTATGGGAACCATTGGAGCAGGTGCCAACACTGGGAAGATGAACAATGGTGGTGGCAATGCCAATGGTGGCAAGAAAGGAGGCCCAAATCAGAATTTGGGAATGAAGGAGAATCCTACTAGGGGGCTTGATCAGAAAACAATGGCAGCCCTTAAATTGAACGGTGGCCACCTGGGTGGCGAAGGCCTCAACCTCAACCTCGGTGAAGCCAAAAGGGCCAATGACATTGGTGCCATGATGAATTTAGCTGGTTTTAATGGAAATGGTGCTAATGTTGGTAGTGCCACTGTTCTAGGGGCTAATAATACTAATGGCATGGGAGGTTTTCCTGTTCAGTCCAATAATATGATTCCAGGGTCCTCTGCAGCTTTTTCAAATGGTGGTATTGCTGCAGGTCAATATCCATCTTCTCTGCTAATGAACATGAATGGCTTCAATAACCATCCGTCCCCATCTCCATTGGTGATGAACATGAACATGCAGGCTAGACAAGCCATGCAGCAACAGCCCCAGATGATGTATCACAGGTCTCCCTTTATTCCCCCTAACACTGGCTATTACTACAACCATAGTAATAGCTACAGCCCTGCACAATACTCCTATTCCTATGGCTTGCCTAGTTACCCTGGGGGCGATGATCACTCTGCAGCTCACATGTTCAGTGATGACAATACCAGTAGCAGTTGTTCTATAATGTAA 1425 0.4519 MDGEAETFTSKLLGANSRLYSASNYLKIRSSSSEGYDIIQYKSHLILACTNPHNADLTSHTLTLATLHQITHAMPRTMVAKQGFWTVTKTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWCQKNQNQKQKSNNAKDDKNKGQKQALVKGLEAFKNQQKFPAFSSEEDEYYSEYEDDDDEEDEEMRFLREKANQLQMLKQQAANANNVRKSMGTIGAGANTGKMNNGGGNANGGKKGGPNQNLGMKENPTRGLDQKTMAALKLNGGHLGGEGLNLNLGEAKRANDIGAMMNLAGFNGNGANVGSATVLGANNTNGMGGFPVQSNNMIPGSSAAFSNGGIAAGQYPSSLLMNMNGFNNHPSPSPLVMNMNMQARQAMQQQPQMMYHRSPFIPPNTGYYYNHSNSYSPAQYSYSYGLPSYPGGDDHSAAHMFSDDNTSSSCSIM 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01331 474 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 88 474 - -
Spst10g01331 474 MobiDBLite consensus disorder prediction 248 279 - -
Spst10g01331 474 CDD HMA 92 151 IPR006121 GO:0046872
Spst10g01331 474 MobiDBLite consensus disorder prediction 194 213 - -
Spst10g01331 474 ProSiteProfiles Heavy-metal-associated domain profile. 88 151 IPR006121 GO:0046872
Spst10g01331 474 Gene3D - 86 159 - -
Spst10g01331 474 Coils Coil 203 240 - -
Spst10g01331 474 Pfam Heavy-metal-associated domain 93 146 IPR006121 GO:0046872
Spst10g01331 474 SUPERFAMILY HMA, heavy metal-associated domain 87 153 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01331 Spst-Chr10 13840815 13849619 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01331 10 13840815 13849619 Spst10g01331 10 13840815 13849619 ECH