Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00621 ATGACTGATATCACTGACGATATTGCTGAGGAAATCTCCTTCCAGAGCTTCGATGACGACTGCAGGTTGCTCGGGAATCTCCTCAACGACATTCTCCAGCGCGAGGTTGGCACCAGCTTAGTTGAAAAACTCGAAAGGATTCGAGTCCTTGCTCAGAGTGGATGTAATATGAGGCAGGCGGGTATTCTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCAGAGTTGTCAAAGATGACACTAGAAGAAGCTTTCACCCTTGCTCGTGCATTCAGCCACTATCTTACTTTGATGGGCATAGCTGAGACCCATCATAGGGTTCGTAAAGGAGGGAATATGGCACAAATTGCAAAGTCTTGCGATGATATATTTAATCAGCTGGTGCAGGGTGGAGTTCCCCCAGAAGAACTTTATGAGACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTCACGGCTCATCCCACACAGATTAACCGTCGAACCTTGCAATTCAAACACGTTAGAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTAGCACTGAAGAACGAGAAATGGTGATAGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTAAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTTTCAACATTGTGGACCAGTCACTATGGAAAGCTGTCCCTCATTACTTACGTCGAGTCAGCAATGCTTTGAAGAAGCATACAGGAAAGCCACTTCCTTTGACCTGCACTCCCATAAAGTTTGGATCTTGGATGGGAGGAGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTATCTAGATGGATGGCAATTGATCTCTATATCCGGGAAGTGGATAGCCTCAGATTTGAGCTATCCATGAGCCAGTGCAGTGATAGGCTGTCAAGACTGGCACATGAAATTCTAGAAGCTAAACATGAGAATCCCCGTGACAATTGGAACCAATCTGTGAATAGAAGTCTCGCACTCCCAACACAACTTCCAGCTAGAGCTCATTTACCTTCTATTGCTGAAAATGGTGAATCTCGGCATCCCAGACTAGACATTCCTGGAGCTGATTACACGCAATCTAATCACAAGGATGGTGGGTCTTCCTTGAGTTCAACTACATCGAAAAATGCCAATCCCAATATTCAACTATCAGGACCAAGTTCAGTGAATTCCAGTGCTTCTTCAGCTGCAATTTCATCTTCTTTTGGTCAAAAGAAATTGTATGCAGAATCCCAGACAGGAAAGTCCACTTTTCAGAAGCTTTTAGAGCCAATGCTTCCTCAACTTCCTGGAATTGCTCCATATAGAGTTGTCCTGGGGAATGTTAAGGATAAGCTTGAGAGAAGCCGAAGACGGTTAGAACTACTTCTTGAGGATGTTGCATGTGACTATGACCCTTTAGAATACTATGAGACATCTGATCAGCTTTTGGAACCTCTGCTTCTCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTCGTAGAGTTGCTACGTTTGGAATGGTGTTAATGAAGCTTGACTTACGTCAGGAATCTGGGAGACATGCAGAAGCACTTGATGCAATAACACAGTATTTGGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAGTTGGACTTTTTAACAAAAGAACTGAAAGGGAAGAGGCCTCTAGTTCCTGTTAGCATAGAGGTTCACTCTGATGTTAAAGAAGTCTTGGATACATTCCGAATTGCTGCAGAACTAGGGAGTGATTCACTTGGAGCTTATGTGATATCTATGGCCTCAAATGCAAGTGACGTCCTTGCAGTTGAGCTTTTACAGAAGGATGCACGGCTTGCTGCTATTGGGGAGTTGGGAAAAGCATGTCCTGGTGGAACGTTGCGAGTGGTACCTCTGTTTGAAACTGTGAAAGATCTTAGAGGAGCTGGTTCAGTTATCCGAAAACTTTTATCAATAGACTGGTACCGTGAACACATCATTAAGAACCATAATGGACATCAAGAGGTTATGGTTGGATATTCTGATTCGGGTAAAGATGCTGGTCGCTTTACCGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAATGATTATGGTATAAAGGTTACACTATTCCACGGCCGTGGAGGCAGTATTGGTCGTGGTGGTGGGCCAACATATCTGGCTATTCAGTCCCAACCCCCTGGGTCTGTGATGGGAACGCTTCGGTCTACTGAGCAGGGAGAGATGGTGGAGGCCAAGTTTGGGTTGCCACAAATAGCTGTTAGACAACTTGAGATATACACAACAGCCGTGCTACTTGCAACCCTTCGTCCTCCTATTCCTCCCCGGGAAGAAAAATGGCGTAATGTCATGGAAGAGATCTCAAACATCAGTTGCCAGTGTTACCGCAATGTAGTGTATGAAAATCCAGAATTCCTGTCCTACTTCCATGAAGCCACACCAGAGGCAGAACTTGGCTTCCTTAACATAGGTAGCCGCCCTACAAGAAGGAAGAGCTCAATAGGAATTGGACACCTTCGTGCAATTCCCTGGCTATTTGCATGGACACAGACAAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGAGCTTGTGAGAAAGGTTACACTGAAGACCTAAAAGCCATGTACAAAGAATGGCCATTCTTTCAAAGTACCATAGACCTCATTGAGATGGTTTTGGGCAAAGCAGACATTCCTATAGCCAAGCACTATGATGAAGTCCTTGTGTCACAGGAGAGGCAAGAGCTTGGTAGCGAACTCAGAAGTGAGCTCATGACAGCTGAAAAGTTTGTACTAGTGATTAGTGGGCACGAGAAACTTCAGCAGAACAATAGGAGCTTGAGGAGGCTGATTGAGAATAGACTGCCCTTTCTCAATCCCTTGAACATGTTGCAGGTGGAGATCCTCAAGAGGCTAAGACGTGATGATGACAACCGTAAAATCAGAGATGCTTTGCTTATCACCATAAATGGGATTGCTGCAGGGATGAAGAATACTGGTTGA 3111 0.4471 MTDITDDIAEEISFQSFDDDCRLLGNLLNDILQREVGTSLVEKLERIRVLAQSGCNMRQAGILNMAELLEKQLASELSKMTLEEAFTLARAFSHYLTLMGIAETHHRVRKGGNMAQIAKSCDDIFNQLVQGGVPPEELYETVCKQEVEIVLTAHPTQINRRTLQFKHVRIAHLLDYNDRPDLSTEEREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGFNIVDQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMSQCSDRLSRLAHEILEAKHENPRDNWNQSVNRSLALPTQLPARAHLPSIAENGESRHPRLDIPGADYTQSNHKDGGSSLSSTTSKNANPNIQLSGPSSVNSSASSAAISSSFGQKKLYAESQTGKSTFQKLLEPMLPQLPGIAPYRVVLGNVKDKLERSRRRLELLLEDVACDYDPLEYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAEALDAITQYLDMGTYSEWDEEKKLDFLTKELKGKRPLVPVSIEVHSDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAAIGELGKACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPIPPREEKWRNVMEEISNISCQCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPTRRKSSIGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGYTEDLKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQERQELGSELRSELMTAEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNRKIRDALLITINGIAAGMKNTG 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00621 1036 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1036 IPR022805 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Spst10g00621 1036 MobiDBLite consensus disorder prediction 357 408 - -
Spst10g00621 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 406 530 - -
Spst10g00621 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 289 378 - -
Spst10g00621 1036 Coils Coil 457 481 - -
Spst10g00621 1036 FunFam Phosphoenolpyruvate carboxylase 4 408 530 - -
Spst10g00621 1036 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 MobiDBLite consensus disorder prediction 378 408 - -
Spst10g00621 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 694 706 IPR033129 -
Spst10g00621 1036 Pfam Phosphoenolpyruvate carboxylase 444 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 Pfam Phosphoenolpyruvate carboxylase 19 329 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1036 IPR015813 GO:0003824
Spst10g00621 1036 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Spst10g00621 1036 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00621 Spst-Chr10 6350042 6358403 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00621 10 6350042 6358403 Spst10g00621 10 6350042 6358403 ECH