Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00620 ATGAAGAGCACCAAGGCTGTTAGCCATGCCGTATTTGTCATGTTCATCCTCTCTCTGAGTGCAAAATGCTGGGGACAAGAAGACCTTGATATAGCTCCTATGGAGAAAGCAGAGCAAGAAGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTCCTGGAATGGCTCAGATCTCTATCCAGACCCTTGTGGTTGGACTCCAATTCAGGGGGTCTCTTGTGATCTGTTTAATGGGTTTTGGTATGTTACTGTCTTGAACATTGGACCCGTCCATGACAATTCCCTCAGTTGTGCTCAAGATTTGGAATTTAGGCCGCAGCTATTTGAGCTCAAGCACCTAAAATCTCTATCGTTCTTCAGTTGCTTTCAATCACAAAACAGGTTTCCAACTACCATTCCCGCTGGAAACTGGGAGAAACTGGCTGGAAGCTTAGGATCACTGGAGTTTAGATCAAATCCAGGTCTCATTGGAAACATTCCCTCGGGTTTTGGTGTCCTCGAGAACCTCCAATCACTAGTACTATTAGAAAATGGTGTAACAGGTGAAATACCATCAAGCATTGGCAATCTCATCAAGTTGAAGAAGCTTGTTCTTGCTGGAAACTATCTTAGCGGGAGGATCCCAGATGTTTTTGATGGGTTGAATGAGTTATTAATCTTTGATTTAAGTAGTAATTCATTATCTGGGTCTTTGCCTTTGACTCTTGGAAGCTTAACTTCAGCATTGAAGCTTGATGTGAGCCACAATCACCTTGAAGGGAATCTTCTAAATGAGTTTGCTAATCTTAAGAATATGACCCTTTTGGACCTTAGGAATAACAATTTCACTGGTGGATTGACCTTGTCTTTGCAAGAGATGCACTCCTTAGAGGAATTGGTTGTGTCCAACAATCCAATAGGTGGAGATATCAGGGCCCTAAAGTGGGAAAACCTCAAGAACTTGGCAATTTTGGAACTCTCTAACATGGGGTTGACAGGAGAAATTCCTCAGTCTGTATCAGAATTGAAGAGGCTGAGATTTTTGGGACTTAGTGACAACAACCTCACAGGCAACCTGTCACCAAAACTGGAAACTCTTCCTTGTCTCAATGCACTTTACCTAAGTGGAAACAATATCACGGGAGAGATTAACTTCTCTAAAGAGTTTTTGAAAAAAATGGGAAGGCGTTTTGGGGCCTGGAACAACCCTAACCTTTGCTACCAAGTTGGAGTAATATCAACAAACCATGTTCCATATGGGGTAAAGCCATGCCAGAAAGAGGTCAATTTGTTAGAATCTAATTCAAAAACTGAGTTGATCAATGGGGATATGAATGAGACCTTCCATTTCATAGCCTCTATGGGATTTTCTAGCTGTGCTACTAATGGCTTCTGGTGGACTTTGATGGAAGAAATATTGATGATGGACAGAGGGACAGGCGCAACTATGAGGTTGAATGACAGCTCAGAACTTCTCCGGCCAAAGCATCAACCGCGTTTTCCATACAAAGGCCTTGTTTTCAATTTCTTCCCCAAAGGGCCAGGTTTTGGATCTTTTCCCAGAACTGTAGGGCAAAAGGCAATAATAGAAGGCTCAAAGTCTTCCAAGTTGCCCTTGGGAAAACTCAGGCCTAAGGAAAAGAATAAAGACTGA 1635 0.4251 MKSTKAVSHAVFVMFILSLSAKCWGQEDLDIAPMEKAEQEALYSTIQGFVGDSWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTVLNIGPVHDNSLSCAQDLEFRPQLFELKHLKSLSFFSCFQSQNRFPTTIPAGNWEKLAGSLGSLEFRSNPGLIGNIPSGFGVLENLQSLVLLENGVTGEIPSSIGNLIKLKKLVLAGNYLSGRIPDVFDGLNELLIFDLSSNSLSGSLPLTLGSLTSALKLDVSHNHLEGNLLNEFANLKNMTLLDLRNNNFTGGLTLSLQEMHSLEELVVSNNPIGGDIRALKWENLKNLAILELSNMGLTGEIPQSVSELKRLRFLGLSDNNLTGNLSPKLETLPCLNALYLSGNNITGEINFSKEFLKKMGRRFGAWNNPNLCYQVGVISTNHVPYGVKPCQKEVNLLESNSKTELINGDMNETFHFIASMGFSSCATNGFWWTLMEEILMMDRGTGATMRLNDSSELLRPKHQPRFPYKGLVFNFFPKGPGFGSFPRTVGQKAIIEGSKSSKLPLGKLRPKEKNKD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00620 544 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 39 245 - -
Spst10g00620 544 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Spst10g00620 544 FunFam Piriformospora indica-insensitive protein 2 37 208 - -
Spst10g00620 544 FunFam Piriformospora indica-insensitive protein 2 306 407 - -
Spst10g00620 544 Gene3D Ribonuclease Inhibitor 210 306 IPR032675 -
Spst10g00620 544 FunFam Piriformospora indica-insensitive protein 2 209 305 - -
Spst10g00620 544 SUPERFAMILY L domain-like 45 378 - -
Spst10g00620 544 Gene3D Ribonuclease Inhibitor 36 209 IPR032675 -
Spst10g00620 544 Gene3D Ribonuclease Inhibitor 307 404 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00620 Spst-Chr10 6336142 6348934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00620 81 458 Receptor kinase-like Gene Family AT4G08850 30.882 7.10e-34 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00620 10 6336142 6348934 Spst10g00620 10 6336142 6348934 ECH