Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00608 ATGACTTTACTCTACTCTCTCTTCATCTTTTTCTTCTGCATTATCACCACCTCTGCACCTCCACCATCACCACCACCATACCCTTACGGTTTCTCCTACCGCATTAACCGTGGCACTTCCGCCAACTCCACCGACTCCTTCAACACCACATGGCTCTCCGACCGTTTCTTCTCTGCCGGCTCCTCCGCCCTCGTCTCCCAACCTCTCAACTTCCCCCTCCCCTCCGAGAAAACCCTCCGCTTCTTTCCTCCCTCCTCCTGTGGCAAGAGAAACTGCTACACCTTCCCCTCCCTCCCCTCCTCCTCTCGCTACCTTCTCCGCACCTTCACCGTTTACGACAACTACGACGCCAAGTCCCGCCCTCCCTCCTTTGACGTCGCTCTCTCATCAACCGTCCTCTTCAGCTGGCGCTCTCCCTGGCCCGAGTCCACCGCTGTCAAAGGCGCCTACTCCGACCTCTTCGCCACCCTCCCCAACACCTCCTCCTCCCTCGATCTCTGCTTCTACGGCTTCGCAACCGACGCCCCTCTTGTCTCCTCCATCGAGCTCCTCCAGGTCCATCCTGCCGCCTACAACGCCCCCGACAACATCATCCTCGTCAACTACGGCCGCATTTCCTGCGGCACCCCGCACCACTGGGGTGCCGACTTCTCCAACGACACCGACCGCTTCGCCCGCTCCTGGCAGCCGGACTCCGCCTTCCGAAAAATCCCCCAATATTCCAGCGACGTCCGCTTCCTCTCCACAATGAACTCAATCTCCGGCGCCGATGAGGAGCCTAATTACTTCCCCATGAAGTTGTACCAGTCGGCGGTGACCACGGAGGGGCCATTGGTGTACGAATTGGGTGTGGACGCGAAGATGGACTATACGGTGTGGCTGCACTTCGCGGAGATCGATTCCAGCGTTAAAAAAGCAGGGGAGAGGGTGTTCGACGTGCTCATCAACGGCGATAATGTGGCCAGGGTTGACATATACAAACAAGTTGGTGGTTTCTCTGCGTTGACTTTGAATTACACCATCAAGAACTTGAGCTCTGACGTGTTGACACTGAAGTTCGTGCCAGCTGTTGGTGCCCCTCTCATTAGTGCCGTTGAGAATTACGCCTTGGTCCCTATCGATCCTTCCACTCTCCCTCTTCAAGTGACTGCGATGAAGGAGTTGAAAGAGTCGCTTCGTATTCCTGATAGAATGGGTTGGAACGGTGATCCCTGTGCCCCTACTACATGGGATGCTTGGGAGGGTGTTACCTGCCGCATGACTACCGATAAAACTGCTCTCGTCATAAGTGAGATAGATCTTGGCAGTCAGGGCTTGAAAGGGTACATCAGCGACCAGATTAGTCTTTTGTCAGACTTGGTAAATCTCAATTTGAGTTCTAATTCCTTGGCGGGTGAAATACCACCGGGACTTGGTCAAAAATCTCTTACACAAGTGGATTTATCCAACAATCAGTTAACGGGATCCATTCCTGACGACTTAGCATCTTCGAATTTGAAGCTCGTGCTATTGAATGGTAACCTATTGGAAGGACGAGTTCCAGAGCAACTTTATTCGGTGGGTGTGCATGGTGGATCTATTGATCTCTCTGGCAACAAGGGACTGTGCGGTGTACCATCTCTTCCGTCATGTCCTATATTTTGGGAGCACGGCAGATTATCCACTCGGGGTAAACTTGCAATAGGCTTGTCATGTCTTCTTGTTTTCTGTGTGGTACTGCTGCTAGCATATATCTATATCAGGAGGAAAAGGAACGATTATGATTTTGCTCTGCCTCATGAGTTAATGTCTTTAGCTGCCAAGAGAAACCGATATCAGAGGCAGAAAACATTGATGCTTCTTGAGCTAGAGAGTCAACATGCCAAGGGATTGCCTTCACCTTTTACACCTCTATAA 1896 0.5216 MTLLYSLFIFFFCIITTSAPPPSPPPYPYGFSYRINRGTSANSTDSFNTTWLSDRFFSAGSSALVSQPLNFPLPSEKTLRFFPPSSCGKRNCYTFPSLPSSSRYLLRTFTVYDNYDAKSRPPSFDVALSSTVLFSWRSPWPESTAVKGAYSDLFATLPNTSSSLDLCFYGFATDAPLVSSIELLQVHPAAYNAPDNIILVNYGRISCGTPHHWGADFSNDTDRFARSWQPDSAFRKIPQYSSDVRFLSTMNSISGADEEPNYFPMKLYQSAVTTEGPLVYELGVDAKMDYTVWLHFAEIDSSVKKAGERVFDVLINGDNVARVDIYKQVGGFSALTLNYTIKNLSSDVLTLKFVPAVGAPLISAVENYALVPIDPSTLPLQVTAMKELKESLRIPDRMGWNGDPCAPTTWDAWEGVTCRMTTDKTALVISEIDLGSQGLKGYISDQISLLSDLVNLNLSSNSLAGEIPPGLGQKSLTQVDLSNNQLTGSIPDDLASSNLKLVLLNGNLLEGRVPEQLYSVGVHGGSIDLSGNKGLCGVPSLPSCPIFWEHGRLSTRGKLAIGLSCLLVFCVVLLLAYIYIRRKRNDYDFALPHELMSLAAKRNRYQRQKTLMLLELESQHAKGLPSPFTPL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00608 631 Gene3D - 203 369 - -
Spst10g00608 631 FunFam Putative LRR receptor-like serine/threonine-protein kinase 380 545 - -
Spst10g00608 631 Pfam Malectin-like domain 40 369 IPR024788 -
Spst10g00608 631 Gene3D Ribonuclease Inhibitor 381 545 IPR032675 -
Spst10g00608 631 PANTHER OS07G0107800 PROTEIN-RELATED 35 600 - -
Spst10g00608 631 SUPERFAMILY L domain-like 382 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00608 Spst-Chr10 6155312 6159172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00608 46 611 Receptor kinase-like Gene Family AT2G14510 27.740 2.06e-34 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00608 10 6155312 6159172 Spst10g00608 10 6155312 6159172 ECH