Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00570 ATGGCACTCTCGCGCCTTCGCCACCCTCTCTTCTCTCGCTCCCTCCACATCCTCTCTTATTCCACCAGATCCCTCTATCGAGCCTCTAATTCAACGATTTCTGCCGTGGGAACTGATACAGATATAAGGCTCAAGTCTTGCTCAGGGATTTTTGGAATTCCTTATAGATATTTGAAGTCAAAGTGGACTGAAGTCAAATACTTTTCATCTTCAGATTCTTCACATGAGGTCCTTGGGATGCCTGCTTTATCTCCTACAATGACTCAAGGCAATATTGCAAAGTGGAGGAAGAAAGAAGGAGAAAAGATAGAAGTGGGGGATGTCCTATGTGAAATTGAAACTGACAAAGCTACACTAGAATTTGAAAGTCTTGAAGAGGGATTTCTGGCAAAGATATTGGTACCAGAAGGTTCAAAGGATGTGCCCGTTGGACAACCCATTGCAATAACAAATATTAATGGCTTAGATGACATTGAAATTGACTTGCAAATTGGAAGTATTTCTAACTATGGCCTTGATAAGGTTGAGGATGAAAAGGACATCCAAAATGTTCCTGCTTCGGTGGGGGGTGAGACAGGGGTTGAAGAGAAGAAACCAGCACAACAGGATGTTACAGATGAGGGGAAACAAGAATCAATTTCTACTACAATTAATGCATCAGAACTTCCTCCTCGTATCCTTCTTGAAATGCCAGCTTTGTCTCCGACAATGAACCAAGGAAACATTGCTAAATGGAGGAAACAAGAAGGAGACAAGATTGAAGTGGGTGATATTTTATGTGAGATAGAGACAGACAAAGCTACGCTTGAATTTGAAACTCTTGAAGAGGGGTACCTGGCTAAGATACTTGCTCCAGAAGGTTCGAAAGATGTGGCAGTTGGGCACCCTATTGCAATAACAGTTGAAGATGCAAGTGATATTGAAGCTATAAAGAATTCTGTTAGCAGTGGCTCAACAAACCAACAGAAGACCCCCCAACGTGATGCTAAAAGTGAGGTTAAAGCTAAAAGAAACAAGATAACTCGAATCAGTCCAGCTGCAAAGTTGCTAATTACAGAGTATGGATTGGATGCATCAACATTGAATGCAACTGGTCCTTATGGCACCCTACTGAAAGGGGATGTTCTTTATGAAATTAAGTCGGGAAAATTGTCTCCAAAACCTGCTTCATATAAAGAAAAGGCAGTACCATCTCAAAGTTATCAACAAGTTGCAGCTTCCCAAGAATCAAAGTCTGACTTGAAGCAGTTAGATGCTTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATCGCCAAGAGACTGTTGGAATCAAAACAAAATACACCACACTTATATTTATCATCAGATGTTATACTGGATCCTCTTCTTTCCCTTCGAAAGGATCTTAAAGAGCAGTTTGATGTTAAAGTTTCTGTGAATGACATCATTATCAAAGTTGTAGCTGCTGCTCTCAGAAATGTACCAGAAGCAAATGCATACTGGAATGTCGAGAAGGGTGAGGTCATTTTAAATGATTCTATTGACATATCCATAGCAGTTGCCACGGATAAGGGCTTGATGACTCCAATAATAAAAAATGCTGATCAGAAAACAATCTCTGCTATCTCTTCAGAGGTCAAGGAACTAGCTGCAAAGGCACGTGATGGCAAGTTGAAGCCACATGAATTCCAAGGGGGGACTTTTAGCATTTCAAATTTAGGAATGTTTCCTGTGGATAAATTTTGTGCTATCATAAACCCCCCTCAGGCCTGCATTCTTGCTGTGGGGAGAGGCAACAAAGTTGTGGAAGCAGCAATTGGAGATGATGGAGTTGAGAAGCCATCGATTGCCAATAAGTTGAGCTTAACGTTGTCTGCTGATCATCGTGTTTTTGATGGCAAGGTTGGAGGTGCATTTCTCTCTGCGTTGCAATCAAACTTCAGTGATATAAGACGGCTTCTTTTATAA 1953 0.4101 MALSRLRHPLFSRSLHILSYSTRSLYRASNSTISAVGTDTDIRLKSCSGIFGIPYRYLKSKWTEVKYFSSSDSSHEVLGMPALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSKDVPVGQPIAITNINGLDDIEIDLQIGSISNYGLDKVEDEKDIQNVPASVGGETGVEEKKPAQQDVTDEGKQESISTTINASELPPRILLEMPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSKDVAVGHPIAITVEDASDIEAIKNSVSSGSTNQQKTPQRDAKSEVKAKRNKITRISPAAKLLITEYGLDASTLNATGPYGTLLKGDVLYEIKSGKLSPKPASYKEKAVPSQSYQQVAASQESKSDLKQLDAYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVILDPLLSLRKDLKEQFDVKVSVNDIIIKVVAAALRNVPEANAYWNVEKGEVILNDSIDISIAVATDKGLMTPIIKNADQKTISAISSEVKELAAKARDGKLKPHEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEAAIGDDGVEKPSIANKLSLTLSADHRVFDGKVGGAFLSALQSNFSDIRRLLL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00570 650 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 342 379 IPR004167 GO:0016746
Spst10g00570 650 MobiDBLite consensus disorder prediction 185 213 - -
Spst10g00570 650 SUPERFAMILY Single hybrid motif 78 154 IPR011053 -
Spst10g00570 650 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 405 648 - -
Spst10g00570 650 Pfam e3 binding domain 342 376 IPR004167 GO:0016746
Spst10g00570 650 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 250 279 IPR003016 -
Spst10g00570 650 MobiDBLite consensus disorder prediction 312 326 - -
Spst10g00570 650 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 221 325 - -
Spst10g00570 650 SUPERFAMILY CoA-dependent acyltransferases 419 650 - -
Spst10g00570 650 Gene3D - 342 383 IPR036625 GO:0016746
Spst10g00570 650 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 223 650 IPR045257 GO:0006086|GO:0045254
Spst10g00570 650 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 420 649 IPR001078 GO:0016746
Spst10g00570 650 SUPERFAMILY Single hybrid motif 227 317 IPR011053 -
Spst10g00570 650 ProSiteProfiles Biotinyl/lipoyl domain profile. 225 301 IPR000089 -
Spst10g00570 650 CDD lipoyl_domain 230 299 - -
Spst10g00570 650 Gene3D - 404 650 IPR023213 -
Spst10g00570 650 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 336 379 IPR036625 GO:0016746
Spst10g00570 650 Pfam Biotin-requiring enzyme 228 299 IPR000089 -
Spst10g00570 650 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Spst10g00570 650 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Spst10g00570 650 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 181 - -
Spst10g00570 650 MobiDBLite consensus disorder prediction 312 337 - -
Spst10g00570 650 Gene3D - 69 160 - -
Spst10g00570 650 Gene3D - 226 325 - -
Spst10g00570 650 CDD lipoyl_domain 80 149 - -
Spst10g00570 650 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00570 Spst-Chr10 5774265 5788022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00570 218 650 Acyl Lipid Metabolism Gene Families AT3G13930 40.435 1.08e-101 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00570 10 5774265 5788022 Spst10g00570 10 5774265 5788022 ECH