Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07886 ATGAGTGCTGCTTCTCTGATTCCTGCGTCCTGGTTACCATCACTTGGTCTGGCTTCTCCTTTTAAGGCTGGTTCTTCCCCTGTGAGTGTGATTGCAGGCGGTGAGAGTGTTCGGTTTCGCCTAGACAATTTGGGACCTCAACCAGGTTCAAGGAAGAAGGCTAAGAGAAAGGGACGAGGGATATCAGCAGGGCAAGGAGCAAGTTGTGGTTTTGGAATGAGGGGTCAGAAATCTCGATCTGGACCTGGCGTTAGGAAGGGTTTCGAAGGTGGCCAAATGCCACTCTATCGACGAATTCCCAAACTCAAAGGAATTGCAGGAGGTATGCATGCGGGATTGCCAAAATATGTCCATGTAAATATGAAGGACATAGAAGATGCTAGATTTCAGGACGGAGATGAGATTTTGGGCGAAGGAGAACTAAGCAAGAAGTTGACAATAAAAGCCCGTGCCTTTTCCGCATCAGCAAAGAAGAAACTTGAGAATGTTGGCTGTTCCCTCACTGTACTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTTGCTAAAAACCTTGCACGTGCTGAAGAATACTTTGCCAAGAAGCGAGCTGCAGCTGCTTCTGAACCAGCCTCAGCTTGA 621 0.4815 MSAASLIPASWLPSLGLASPFKAGSSPVSVIAGGESVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLKGIAGGMHAGLPKYVHVNMKDIEDARFQDGDEILGEGELSKKLTIKARAFSASAKKKLENVGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAAAASEPASA. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07886 206 SUPERFAMILY Ribosomal proteins L15p and L18e 42 169 IPR036227 -
Seca8g07886 206 MobiDBLite consensus disorder prediction 41 89 - -
Seca8g07886 206 PANTHER 50S RIBOSOMAL PROTEIN L15 131 191 IPR005749 GO:0003735|GO:0006412|GO:0015934
Seca8g07886 206 NCBIfam 50S ribosomal protein L15 41 167 IPR005749 GO:0003735|GO:0006412|GO:0015934
Seca8g07886 206 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 65 167 IPR021131 -
Seca8g07886 206 Hamap 50S ribosomal protein L15 [rplO]. 41 170 IPR030878 GO:0003735|GO:0006412|GO:0015934
Seca8g07886 206 Gene3D - 101 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07886 Seca-Chr8 176371330 176375375 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07886 8 176371330 176375375 Seca8g07886 8 176371330 176375375 ECH