Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07882 ATGTTTGGCAATGGCGAGTCAAAAGCGTGTCCATGGCCTTTGACTGATGCAAAGCAAAGAGGCAACAGTGACGTTAAATCGCAGTCAATGCTCAACACCTCTGTTCACCGACCAACCATGGAGCTATCTGTGACACTCAGATTCCGATCCCACCCACTCAATCAGAATCTAATACCCATTTCAACCAAACCCAAGAAACCCACTTCAAACACTATACTGACGGTTAGGGCCAAGAAAAAGTCAACCATTGAAGGTCTCAGCGATGAGTTGAAAGCCATTGCTTCTCAGAACCTTGACTTCGCATCCGAGCGGAGACGGGTCCGATCAGCCTTCACCCACTTGCAACAGCAACTGGACCATTACTTATTCAAGACTGCTCCTGCTGGGATCAGAACTGAAGAATGGTATGAAAGGAACTCGAGGGGATTGGAAATTTTCTGTAAAAGCTGGATGCCAGAACCCGGAGTTCCAATCAAGGCAGCTTTGTGTTTCTGCCATGGTTATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAAGCGAATTGCTGCTTCTGGTTATGGTGTTTATGCTATGGACTATCCGGGTTTTGGTCTATCTGAAGGATTACATGGTTACATACAGAATTTTGATGATTTGGTTGATGATGTTATAGAACATTATACAAAAATTAAAGCAAGGCCTGAGGTAAGAGACTTGCCTCGTTTTATATTGGGGCAGTCAATGGGTGGAGCAATTGCTCTTAAAGTTCATTTGAAGGAACCAAATGATTGGAATGGAGTAATCCTTGTAGCACCAATGTGTAAAATTGCAGAAGGCATGTTACCATCAACTACAGTTTTGAAGGTATTAAATCTTTTGTCTAAAGTGATGCCGAAGGCAAAACTGTTCCCACACAAAGATCTATCAGAGCTAACTTTCCGAGAACCAGGCAAGAGAAAATTGGCCGTTTACAATGTTATTTCTTATGATGATAAAACACGATTGAAAACTGGCATGGAACTTTTAAGTGCTACTCAAGACATTGAGTCACAATTACAGGAGGTTTCAGCTCCATTATTGATTCTTCACGGAGCAGCTGATAAGGTGACAGATCCATTAGTGAGCCAATTTCTATATGAGAGAGCATCTAGCAAGGACAAGACACTGAAGATGTATGAAGGAGGTTATCACGGCATTTTGGAAGGGGAACCTGATGACAGAATTTTTGCTGTCCATAATGACATTATCTCATGGCTTGATTTTAGCAAAACATGCCTGAACCTGGCAATTTCACGCATTAAGCTGCTACAGAACAAGAGAGATGTGCAACTGAAACAAATGCGCAAGGAGATAGCCCAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATTCGGGTAATCCTTCCAATCTTGGTGGAGCATGTAATACGAGAACAAAATATATGGGCTGCATATGAAATATTGGAGTTATTCTGTGAATTTGTTCTTGCACGTGTACCTATAATTGAGAGCCAGAGCCTTCCTTCTCCACATAATAGGGATTGCCCCTCAGATTTGCGAGAAGCCATTGCAAGTATAATTTTTGCTGCTCCTAGATGTTCAGATGTACCAGACTTATTGCACATCAAGAACTTGTTTACCTCTAAATATGGGAAAGAATTTGTCTCTGCAGTATCTGAACTTCGTCCTGACTCAGGCGTGAACCGCACGATAATTGAAAAGCTTTCAGTTAGTGCGCCATCTGGAGAGGTAAAACTCAAGGTCTTGACGGAGATTGCAGAAGAATACAATCTAACATGGGATTCTTCTAAAACTGAGGCAGAATTTAGGAAAAATCATGAAGATCTCTTGGGAGGAACAAAGCAAGCTGGTGCTGGAGCTGCACTTTCTCATACTCCCAGCAAAAAGAGTTCTGATTATTCGTCACCTTGTAATATGGAGCATTCTAACAAGTCTATGCATGATAAACAAGAACATAAACACCTTGAAGCTCCCACCCCTTCTAACAATGATCGATGGTTGAATAATAATGAAATTGAACAGTCACACAAAAATAATGATGTCCCTGTTGGAGATGCCAGAAATGAGACAAAATTTCAATCCTCTGATGTATTGGAGAAGGCCCGAGCCGCCATTGCTTCCGCAGATCGTGCATCTGCTGCTGCTCGTGCAGCTGCTGCGCTAGTACACAGTAACTTTGGATCACTGAAACTGGAAGATAAATCTTCGTAG 2220 0.4225 MFGNGESKACPWPLTDAKQRGNSDVKSQSMLNTSVHRPTMELSVTLRFRSHPLNQNLIPISTKPKKPTSNTILTVRAKKKSTIEGLSDELKAIASQNLDFASERRRVRSAFTHLQQQLDHYLFKTAPAGIRTEEWYERNSRGLEIFCKSWMPEPGVPIKAALCFCHGYGSTCTFFFEGIAKRIAASGYGVYAMDYPGFGLSEGLHGYIQNFDDLVDDVIEHYTKIKARPEVRDLPRFILGQSMGGAIALKVHLKEPNDWNGVILVAPMCKIAEGMLPSTTVLKVLNLLSKVMPKAKLFPHKDLSELTFREPGKRKLAVYNVISYDDKTRLKTGMELLSATQDIESQLQEVSAPLLILHGAADKVTDPLVSQFLYERASSKDKTLKMYEGGYHGILEGEPDDRIFAVHNDIISWLDFSKTCLNLAISRIKLLQNKRDVQLKQMRKEIAQFLQAGQEAIARIRVILPILVEHVIREQNIWAAYEILELFCEFVLARVPIIESQSLPSPHNRDCPSDLREAIASIIFAAPRCSDVPDLLHIKNLFTSKYGKEFVSAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLTEIAEEYNLTWDSSKTEAEFRKNHEDLLGGTKQAGAGAALSHTPSKKSSDYSSPCNMEHSNKSMHDKQEHKHLEAPTPSNNDRWLNNNEIEQSHKNNDVPVGDARNETKFQSSDVLEKARAAIASADRASAAARAAAALVHSNFGSLKLEDKSS. 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07882 739 SUPERFAMILY alpha/beta-Hydrolases 115 415 IPR029058 -
Seca8g07882 739 MobiDBLite consensus disorder prediction 645 662 - -
Seca8g07882 739 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g07882 739 MobiDBLite consensus disorder prediction 678 697 - -
Seca8g07882 739 Pfam Serine aminopeptidase, S33 158 399 IPR022742 -
Seca8g07882 739 PRINTS Alpha/beta hydrolase fold signature 187 202 IPR000073 -
Seca8g07882 739 PRINTS Alpha/beta hydrolase fold signature 354 368 IPR000073 -
Seca8g07882 739 PRINTS Alpha/beta hydrolase fold signature 238 251 IPR000073 -
Seca8g07882 739 FunFam IST1-like protein isoform A 413 605 - -
Seca8g07882 739 MobiDBLite consensus disorder prediction 619 670 - -
Seca8g07882 739 MobiDBLite consensus disorder prediction 627 644 - -
Seca8g07882 739 PANTHER PHOSPHOLIPASE-RELATED 120 415 - -
Seca8g07882 739 FunFam Alpha/beta-Hydrolases superfamily protein 128 420 - -
Seca8g07882 739 Gene3D alpha/beta hydrolase 128 415 IPR029058 -
Seca8g07882 739 Pfam Regulator of Vps4 activity in the MVB pathway 418 594 IPR005061 GO:0015031
Seca8g07882 739 Gene3D - 416 603 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07882 Seca-Chr8 176305052 176314996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07882 75 415 Acyl Lipid Metabolism Gene Families AT1G77420 67.155 5.77e-170 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07882 8 176305052 176314996 Seca8g07882 8 176305052 176314996 ECH