Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07877 ATGACACTCTCCTTTATCTCACCACAACCCCAACACTCCCATTACCATTACCATCCTCCTATTAAATTTCACCATTCCTCACTCACCTCCTCTGCCACCACCCGGAGCAGGCCCCGCTGGCCTCGCATGGACCACCGCCGGAAAGACAAGGTGGTCGTCATCATGGGCGCCACTGGCTCCGGAAAATCGCGTCTTTCCATCGACCTCGCCACCCTCTTCCCTTTCACTGAAATCATCAACTCCGATAAAATGCAAGTCTACAGAGGCCTAGAAATCACCACCAACAAGATCCCCCTCCACCAACGCAACGGCGTCCCCCACCACCTTCTCGGCGACGTCGACCCTTCCCTCGGCGAGTTCTCCCCCTCTGACTTCCGCCGCCGCGCCGGCGACGTCATCTCCGACATCACCTGCCGGAGGAAGCTCCCCATCGTCGTTGGTGGCTCCAACTCATTCGTTCACGCTCTTCTGGCGGAACGATTCGACCCTGAGTCAAACGTGTTCGACGACGAGTCATCGCCGCTAGCGATATCTTCCGAGTTAAGGTACAGGTGTTGCTTCCTCTGGATGGACATATCGTTCCCTGTGCTATCGGAATACTTGCTGAGACGAGTCGATGACATGCTTGACTCGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCGGACGCGGCGAACGGAACCGGGTTGAGAAAAGCCATCGGGGTGCCCGAGTTTGACCGGTTTTTTAAAGAGTATACACCGGGTGAGGATGATTCGGTGCGGGAGGGTGTATACGAGGAAGCAGTGAGGGCGATTAAAGACAACACGTGTCAGCTGGCGAAGAGACAGATAGGGAAGATCTTGCGGTTAAAACGAGCAGGTTGGGACCTACGGAGGATTGACGCCACGGAGGTGTTTCGGGCGGTGCTGACGTCAGGGTCTCACGGTGGGTCTGATATATGGAAGAGGCAAGTGTTGGAACCAAGCGTGAAGATTGTGAGGCGCTTCTTGATGGAGTAG 1005 0.5582 MTLSFISPQPQHSHYHYHPPIKFHHSSLTSSATTRSRPRWPRMDHRRKDKVVVIMGATGSGKSRLSIDLATLFPFTEIINSDKMQVYRGLEITTNKIPLHQRNGVPHHLLGDVDPSLGEFSPSDFRRRAGDVISDITCRRKLPIVVGGSNSFVHALLAERFDPESNVFDDESSPLAISSELRYRCCFLWMDISFPVLSEYLLRRVDDMLDSGMVDELAQFFDPDAANGTGLRKAIGVPEFDRFFKEYTPGEDDSVREGVYEEAVRAIKDNTCQLAKRQIGKILRLKRAGWDLRRIDATEVFRAVLTSGSHGGSDIWKRQVLEPSVKIVRRFLME. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07877 334 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 194 292 - -
Seca8g07877 334 Pfam IPP transferase 178 279 - -
Seca8g07877 334 Pfam IPP transferase 85 161 - -
Seca8g07877 334 Gene3D - 48 332 IPR027417 -
Seca8g07877 334 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 48 332 IPR039657 -
Seca8g07877 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 224 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07877 Seca-Chr8 176239084 176240088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07877 182 332 C2H2 Transcription Factor Family AT2G27760 32.022 1.08e-16 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07877 8 176239084 176240088 Seca8g07877 8 176239084 176240088 ECH