Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07860 ATGACAACTCACAAACTGGCTTTGATCATCGAAAACCCTTCCAACGACAATGAGTTTCTGCTCATGAAGCAGTCGCGCCCTCCCAAATTCCACGATGAAGAATACGATTCTTTCGTTGATTCTGATCTCTGGGACTTTCCATCAGCGCAGTTGAACCCTCTGCGAGCAGATTCAGAGCCTCCGGTTGAGGTGGAGGTTGCGGCCTCACAGTCCGAGTTCAATTTGAGGGAATTCGACATCCGTTCGGCTCTCAACGAGGTGTTTGGACAATTAGGGTCTGAGGCGGTTGAAAGGGGAGAGTGGAAGTTTCATAAGTATGTGAAGGAAGCTGCGTTTGGACCCGGTTTGCCCGTTAACACAGTCTTCCTTGCCGGCAAATTGGTAGCTGAGGACATGGACTTGCGAGATTCATATAAATGGATGTCCCTCCAAAGTTGTCTTAACTGGCTTCTGGAAGTGAAACCACATGGTGACCGTGTAGGACCATTGGTAGTTGCTGGTCTTATAAATGACTCGTCTGTCTCTGCAAAGTGGAAAGTCCCTCCAACCATAAACTATCAGGAGTACCCTCCTGGTCTTATACTTATACCTATGGGAAGTAGGACAGTAAAGCCTTTTCACACAACAAACTTGGTGGTGTTTGCACCTGAAAATATTCCAAATGATTCCAAGGATAAAAATTTCGTTGCATGTGGAGATGCACTAATAGTTGATCCTGGATGTCTATCAAAATTCCATGGAGAGCTAGAGAAAGTTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTCACTCATCATCACCATGATCATGTAGATGGTCTGTCAGTTATCCAGAAGTGCAATCCTGATGTTACTTTGTTAGCACATGAAAATACCATGCATCGCATAAGCAAAGATGATTGGTCACTTGGCTATACCTCAGTTACTGGAGATGAAGACATTTACATTGGTGGTCAGAGATTGAAAGTTATTTTTGCACCGGGACATACAGATGGTCATATGGCCCTGCTTCATGTGAACACTCATGCCTTGATTGTAGGTGATCATTGTGTGGGTCAGGGAAGTGCTGTCTTGGACATAACTTCCGGTGGAAATATGACTGAATACTTCCAGACTACATACAAATTTCTTGAGCTTTCACCACATGCTCTAATACCAATGCATGGGAGAGTAAATCTCTGGCCAAAGCAGATGCTGTGTGGATATCTAAAGAATCGTAGGAGTAGGGAAGCTAATATCTTGAAAGCTATTGAAGCTGGAGCGAAAACATTGTTTGATATTGTTGCATATGTATATTCTGATGTTGACCGCCGTGCCTGGATTTCTGCTTCATCAAATGTGAGGCTCCATGTGGATCATCTGGCCCAGCAACACAAGTTACCAAAGGATTTCTCTCTAGAAACTTTCAATTCCAGTTTGGTTGCATTTGCTGACAATTTGGGTAAATTATAA 1455 0.4364 MTTHKLALIIENPSNDNEFLLMKQSRPPKFHDEEYDSFVDSDLWDFPSAQLNPLRADSEPPVEVEVAASQSEFNLREFDIRSALNEVFGQLGSEAVERGEWKFHKYVKEAAFGPGLPVNTVFLAGKLVAEDMDLRDSYKWMSLQSCLNWLLEVKPHGDRVGPLVVAGLINDSSVSAKWKVPPTINYQEYPPGLILIPMGSRTVKPFHTTNLVVFAPENIPNDSKDKNFVACGDALIVDPGCLSKFHGELEKVVTALPRRLVVFVTHHHHDHVDGLSVIQKCNPDVTLLAHENTMHRISKDDWSLGYTSVTGDEDIYIGGQRLKVIFAPGHTDGHMALLHVNTHALIVGDHCVGQGSAVLDITSGGNMTEYFQTTYKFLELSPHALIPMHGRVNLWPKQMLCGYLKNRRSREANILKAIEAGAKTLFDIVAYVYSDVDRRAWISASSNVRLHVDHLAQQHKLPKDFSLETFNSSLVAFADNLGKL. 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07860 484 Gene3D - 228 395 IPR036866 -
Seca8g07860 484 Gene3D - 397 469 IPR036388 -
Seca8g07860 484 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 214 395 - -
Seca8g07860 484 SUPERFAMILY Metallo-hydrolase/oxidoreductase 232 461 IPR036866 -
Seca8g07860 484 SMART Lactamase_B_5a 225 389 IPR001279 -
Seca8g07860 484 Pfam Metallo-beta-lactamase superfamily 232 350 IPR001279 -
Seca8g07860 484 PANTHER ENDORIBONUCLEASE LACTB2 137 466 - -
Seca8g07860 484 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 397 470 - -
Seca8g07860 484 Pfam Beta-lactamase associated winged helix domain 424 460 IPR041516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07860 Seca-Chr8 176018235 176027896 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07860 8 176018235 176027896 Seca8g07860 8 176018235 176027896 ECH