Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07831 ATGGGCACAGAAAACGCCACAGTGACAGTACACGTGGTTACCAATGGCCATCCTAATCCACTTGATTCTGGCCATGCCCGTCTTCGCGAGCTCGGTTACAAACAAGAGCTCAAGCGTGATCTTTCGGTTCTTTCAAATTTCGCCTTTTCCTTTTCTATTATATCAGTGCTCACTGGAGTCACCACCCTTTACAACACTGGTTTGAACTATGGAGGCACTGTTTCTTTCGTATATGGCTGGTTTGTTGCTTCTGGTTTCACTATGATTGTTGCACTCTCCATGGCTGAAATTTGTTCCTCTTATCCAACCTCTGGTGGCCTTTACTATTGGAGCGCCAAGCTTGCTGGCCCCACATGGGCACCCTTTGCTTCCTGGATTACTGGCTGGTTCAATATTGTTGGCCAGTGGGCCGTGACAACAAGTGTAGATTTTTCACTTGCACAACTCATTCAGGTTATCATTCTCCTTAGTACTGGTGGAAAAAATGGTGGTGGATATGAAGGATCTAAATATGTAGTTATTGCTTTCCATGGGGGAATTTTGCTCCTACATGGTATAATAAACAGCCTTCCTATTTCATTGCTATCATTCTTAGGGCAGTTAGCTGCTATCTGGAATGTTTTAGGTGTTTTTGTGCTTATGATTGTCATTCCATCTGTTTCAACGGAAAGAGCTAGTGCCAAGTTTGTTTTCACTCATTTCAATACTGAGAATGGGGATGGAATCAACAGCAGACCCTACATATTTCTCTTGGGACTTCTAATGAGTCAGTATACCCTAACTGGGTATGATGCATCAGCTCATATGACTAGGATTTCCTGTTTTACTGTAAACTTGCATTTTCAGACAGAGGAGACCAAGGATGCTGATAGAAATGGACCAAAAGGAATTATCAGCGCTGTTGGGATATCTATTATTGTTGGATGGGGTTACATATTAGGCATTACCTTTGCTGTTACAGACATCCCTTACCTTTTGAGTGAAAATAATGATTCTGGTGGATATGCCATAGCTGAGATATTTTATCTTGCATTTAAGAAAAGATATGGCACTGGAGTTGGGGGTATTATTTGCTTGGGAATTGTTGCTGTTGCCATATTTTTCTGTGGTATGAGTTCAGTTACCAGCAATTCAAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCATTGTCATCATTGTGGCATAAGGTCAACAAGCAGGAGGTCCCCATATATGCAGTTTGGCTTTCCGTTATTGTATCATTTTGCATGGCCCTAACGTCTCTTGGAAGCATAGTGGCGTTTGAGGCCATGGTGTCTATAGCAACGATTGGGCTCTATATTGCTTATGCGCTACCTATCTTCTTTAGGGTGACATTAGCACGGAAGCATTTTGTGCCAGGGCCTTTCAACTTGGGTGGTTATGGAGTCATAGTTGGCTGGGTTGCAGTTCTTTGGGTGGTGGCCATCTCCATCCTTTTCTCGATGCCAGTTTCCTACCCAATAACCATTGAGACACTTAACTACACCCCTGTTGCTGTTGGATTTTTGCTTATTCTTGTAGTATCTTACTGGATAATCGCTGGTCGGCTTTGGTTTAAAGGCCCTATAACCAATATTCAAAAGTGA 1614 0.4281 MGTENATVTVHVVTNGHPNPLDSGHARLRELGYKQELKRDLSVLSNFAFSFSIISVLTGVTTLYNTGLNYGGTVSFVYGWFVASGFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPTWAPFASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEGSKYVVIAFHGGILLLHGIINSLPISLLSFLGQLAAIWNVLGVFVLMIVIPSVSTERASAKFVFTHFNTENGDGINSRPYIFLLGLLMSQYTLTGYDASAHMTRISCFTVNLHFQTEETKDADRNGPKGIISAVGISIIVGWGYILGITFAVTDIPYLLSENNDSGGYAIAEIFYLAFKKRYGTGVGGIICLGIVAVAIFFCGMSSVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPIYAVWLSVIVSFCMALTSLGSIVAFEAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGGYGVIVGWVAVLWVVAISILFSMPVSYPITIETLNYTPVAVGFLLILVVSYWIIAGRLWFKGPITNIQK. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07831 537 Pfam Amino acid permease 41 511 IPR002293 GO:0016020|GO:0022857|GO:0055085
Seca8g07831 537 FunFam Amino-acid permease BAT1 35 527 - -
Seca8g07831 537 NCBIfam amino acid permease 28 531 IPR004756 GO:0006865|GO:0016020
Seca8g07831 537 Gene3D Amino acid/polyamine transporter I 35 526 - -
Seca8g07831 537 PANTHER AMINO-ACID PERMEASE BAT1 22 536 - -
Seca8g07831 537 PIRSF AA_transporter 28 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07831 Seca-Chr8 175737821 175743828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07831 88 535 Organic Solute Cotransporters AT2G01170 76.786 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07831 8 175737821 175743828 Seca8g07831 8 175737821 175743828 ECH