Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07829 ATGGAGAAAGTTTGTGAGTTCTGCACAGCTTTAAGGCCGCTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTGGCAAATGCATTGTCTGGCCGCCACCTCAGGACTCTTGTGTGTAACTCATGCAGATATCGTCTTGCTTATGTTCAGTGCTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGCTGCACAGCGTTTCTTTACCACATCAGAAACGAGCTATCAGAACTTTCATGGGCTGCCCTTCTGCCAAAGACTTTGCAACACTCTGGGGTTTTGAATTGAATGAGATTGAAAGCAGTGTCAATCAGGATCAGTTTGCATCTACTTCTTGTGTTTCTTCAAATTTGAATGTGGTAAAAGTCTCAGGAGGAAAGTCTGGCATTCAAACTGGGGTCCTTTCAATGGTATCTAAGGTCAAACTTGATGGGGGATCGGGTAGTCAACAAGGCCAGATATTGTACTGTGATCAAGAGCGACAAATTATTCTGCAGCAGATTGTTGATTTAAAGCGGTTTCAGCTAAATGAGGAGAGTGATCATTCTACAAAGATAAATGGGTTACAAGAAAAAGACTTATCTCCTTCAGTATATCATACTCTTAAGAAATTGGATGAAAAATTCAATCAGCAAGCACAAAACTCCCAGGATCTTGCTACTAATCTTCTGGAAGAAGACAGTCCCATTGTGGAGCAGAATCCTGAAACTTTCTCTTCTGCATTTTCTCAACTTGATAATTTGTCTTCATCTTCAGTTATAGACCTTCCTTTGCATGGAGAATTGTTTTGGTCATGCAAAAGTCCACTTAAAAGTAATCAGGTCAGATACTTACATGTCACTGTTGTGAGCCACAGTTCTAGATGTTAA 903 0.4042 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYRLAYVQCLDHKMLICRDCDQKLHSVSLPHQKRAIRTFMGCPSAKDFATLWGFELNEIESSVNQDQFASTSCVSSNLNVVKVSGGKSGIQTGVLSMVSKVKLDGGSGSQQGQILYCDQERQIILQQIVDLKRFQLNEESDHSTKINGLQEKDLSPSVYHTLKKLDEKFNQQAQNSQDLATNLLEEDSPIVEQNPETFSSAFSQLDNLSSSSVIDLPLHGELFWSCKSPLKSNQVRYLHVTVVSHSSRC. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07829 300 SMART bboxneu5 1 47 IPR000315 GO:0008270
Seca8g07829 300 SMART bboxneu5 48 87 IPR000315 GO:0008270
Seca8g07829 300 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Seca8g07829 300 CDD Bbox1_BBX-like 4 47 - -
Seca8g07829 300 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07829 Seca-Chr8 175707918 175713337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07829 1 291 C2C2-CO-like Transcription Factor Family AT1G68190 35.495 5.67e-48 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07829 8 175707918 175713337 Seca8g07829 8 175707918 175713337 ECH