Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07818 ATGCAGGAAACAGCATTAAACCATGTATGGATGTCTGGATTGCTAAGTGATGGGTTTGGAGCAACACATGGAATGATGAGGAATGATCTCATTTGGGTTGTCTCAAGAATGCAAGTTCTGATTGATTATTATCCCATCTGGGGAGAGGTTGTTGAAATTGACACATGGGTTGGAGCATCAGGCAAGAATGGAATGCGGCGTGACTGGCTGATAAGAAGTCAAGCCACAGGCCACATTTTTGCTCGTGCAACAAGCACATGGGTGATGATGAACCGTAAAACAAGACGCCTCTCCAAAATGCCAGAAGAGGTGAGGGATGAACTCACACCTTGGTTTATAGAGAAGCAAGCAATAAATGAAGACACTCCTGAAAAAATTGTCAAATTGGACAAAGAAGCAAAATACATGAATTCTGATTTAAAGCCTAAGAGAAGTGATTTGGACATGAACCAACATGTGAATAATGTGAAGTATGTCAGATGGATGTTGGAGACCATCCCAGACCAAATTCTAGAGGGCTACCAGTTATCTGGTATCACATTAGAGTACAGAAGGGAGTGTGGAAGCTCAGATATAGTTCAATCACTATGTGAGCCTGAAGAAGATGAAATACTTAATGGTGCAATGGAACCAGATTATTGCACAAGTCTACTAAATGGGTTGTCCTTTGCATCATCAGATATTATAAATGGTGGTGGAGTCCTGACTTGTCTTGAGCAGAGGCCAATAAGGTATACACACCTTTTACAAATCAAAGGAGAGAAACAAAACGATGAAATTGTGAGAGGAAGGACAACATGGAAGAGGAAGTTCGCTACAATGCCATTTTCCACATAG 837 0.4122 MQETALNHVWMSGLLSDGFGATHGMMRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNRKTRRLSKMPEEVRDELTPWFIEKQAINEDTPEKIVKLDKEAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDQILEGYQLSGITLEYRRECGSSDIVQSLCEPEEDEILNGAMEPDYCTSLLNGLSFASSDIINGGGVLTCLEQRPIRYTHLLQIKGEKQNDEIVRGRTTWKRKFATMPFST. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07818 278 FunFam Acyl-[acyl-carrier-protein] hydrolase 1 273 - -
Seca8g07818 278 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 135 267 IPR029069 -
Seca8g07818 278 Pfam Acyl-ACP thioesterase 1 267 IPR002864 GO:0006633|GO:0016790
Seca8g07818 278 CDD 4HBT 25 91 - -
Seca8g07818 278 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 1 120 IPR029069 -
Seca8g07818 278 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 271 IPR045023 GO:0006633|GO:0016297
Seca8g07818 278 Gene3D Hotdog Thioesterase 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07818 Seca-Chr8 175512868 175515679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07818 1 278 Acyl Lipid Metabolism Gene Families AT1G08510 47.312 1.98e-82 252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07818 8 175512868 175515679 Seca8g07818 8 175512868 175515679 ECH