Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07770 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGCTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTCTATCAAGTTCAAATAGATGCAGAACAGCAGAAAGTAACAGTTTCTGGTAGTGTGGATTCTGCAACTTTGATCAAGAAACTGGTCAGATCTGGTAAATATGCTGAGCTCTGGTCTCAGAAAACAAATCAGAATCAAAAGCAGAAGAACAACAATGTCAAAGATGACAAGAACAAAGGGCAGAAGCAAGGACTGGTCAAGGGGCTTGAGGCTGCTTTCAAAAATCAGCAGCAGAAGTTTCCTGCTTTTAGTTCTGAAGAGGATGATGAATACTACGACTTTGATGATGATGAAGAGGATGAAGATGAAGAGATGCGGTTCATCAGGGAGAAAGCCAATCAACTGCAACTTCTGAGACAGCAAGCAGCTGATGCAAATAATGTGAAGAAAGGTATTGGAGCCATTTCTGCAGTTCCAAACAATGGTAAGATGAACAATGTTGGTAATGCCAATGGTGGCAAGAAAGGAGGCCAAAATCAGAATATGGCAATGAAAGACAGCACTGGTGGGCTTGATCCGAAAACCATGGCAGCCCTGAAATTGAACAATGCCCACTTGGGTGGTGAAAGGCTCAATCTTGGAGAAGCTAAAAGGGCAAGTGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGTAGTGGTGCTAATGTTGGCAGTGCTACTGTTCTTGGGGGAAATTCCAATGGTTTGGGAGGCTTTCCTGTTCAGTCCAACAACATGATTCCAGGATCCTCTGCAGCTATTCCAAATGGTGGTTTTGCTACTGGTCAATACCATCCATCATCTCTGCTAATGAACATGAATGGCTTCAATAACCATCCATCCCCATCCCCACTAATGATGAACATGAACATGCAAGCCAGGCATGCCATGCAGCAGCAACCTCAGATGATGTATCACAGGTCCCCTCTTATTCCTCCTAATACTGGCTATTACAACAACAATCATAACTACAGCCCTGCAAATTACTCCCCCTATTATGCATTGCCTAGTTACCCAGCGGATGATCATTCTGCAGCACACATGTTCAGTGATGACAATACTAGCAGCAGTTGTTCAATAATGTAA 1188 0.4259 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRSGKYAELWSQKTNQNQKQKNNNVKDDKNKGQKQGLVKGLEAAFKNQQQKFPAFSSEEDDEYYDFDDDEEDEDEEMRFIREKANQLQLLRQQAADANNVKKGIGAISAVPNNGKMNNVGNANGGKKGGQNQNMAMKDSTGGLDPKTMAALKLNNAHLGGERLNLGEAKRASDIGAMMNLAGFNGSGANVGSATVLGGNSNGLGGFPVQSNNMIPGSSAAIPNGGFATGQYHPSSLLMNMNGFNNHPSPSPLMMNMNMQARHAMQQQPQMMYHRSPLIPPNTGYYNNNHNYSPANYSPYYALPSYPADDHSAAHMFSDDNTSSSCSIM. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07770 395 Coils Coil 147 167 - -
Seca8g07770 395 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
Seca8g07770 395 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Seca8g07770 395 Gene3D - 12 84 - -
Seca8g07770 395 MobiDBLite consensus disorder prediction 81 100 - -
Seca8g07770 395 CDD HMA 16 75 IPR006121 GO:0046872
Seca8g07770 395 MobiDBLite consensus disorder prediction 182 213 - -
Seca8g07770 395 Coils Coil 82 102 - -
Seca8g07770 395 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 395 - -
Seca8g07770 395 FunFam Copper transport protein ATOX1 11 80 - -
Seca8g07770 395 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Seca8g07770 395 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07770 Seca-Chr8 174955402 174957845 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07770 8 174955402 174957845 Seca8g07770 8 174955402 174957845 ECH