Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07184 ATGTTAGTGCCTCCCAAACCCATCAACACCATCACCATCACAATCATGCTCGCCTTCACCTTCTTCCTCCTCTTCTTCTCCGGTTTGCTCCACTTCCCTTCCGTTTCATCCTCTCTCCCACCCATCAACCGCTACCTAACGCCGGAGACCGGAACCACCGCAGAACCTTTCACCGATCTGGTGGCTGCCTTCAGGAAATGGGATTCCCATGTGGGTTGTGCTCGGTTCAGGGAGAAACTAAATGGGGTGACCCTCAATGCCTCAAAGGTCGCTTCTTTGCAAGAGATTGGTGGTGATTCCACGTGTAGGAGCTTGACACTGAACCATGTTAGCGTTTTGGTCAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTACTCTTGCCGTTGTGGGTTGAGCTGTTTGTGGACCAAATCGCCCGTTCTTGCTGACAAGCCTGATGCTTTGTTCTTTGAAACGTCTACGCCTCCGATTCAGAGACGCGTGGGAGAACCACTTCGAGTTTACATGGATCTCGAAGCTGGGCGAAAGAGATCAGGTCGAGAGGATATATATATTAGTTATCATGCCGAAGATGATGTACAATCAACCTATGCTGGTTCTCTGTTTCACAATGGTCGAAACTATCACGTCTCCAATACTAAAAACAATGACATACTTGTTTATTGGTCTTCATCGCGGTGTCTTTCTCAAAGGAATGAACTTGCCAAGAAACTCCTTGGCTTGCTGCCACACCATTCATTTGGCAAGTGCCTGAATAATGTTGGTGGTCTAGACATGGCTCTTTCTTTTTATCCAGAGTGTGCAAATGATGCCAATGTTACACCAAAGTGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAATTTGTTCTTGCAATAGAGAACACTTTCACTGAGAGTTATGTGACAGAGAAGTTATATTATGCCTTGGACTCTGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAGTCATTGGAAGAATTGGCTTCATATGTGAAGGCTGTAGCAAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTACTGGGTAACTATGGAAATACCCGAGCAGTGAGCCTTGACACACTGCCATGCCGGTTATGTGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCAAGAAGCTAG 1224 0.4559 MLVPPKPINTITITIMLAFTFFLLFFSGLLHFPSVSSSLPPINRYLTPETGTTAEPFTDLVAAFRKWDSHVGCARFREKLNGVTLNASKVASLQEIGGDSTCRSLTLNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSPVLADKPDALFFETSTPPIQRRVGEPLRVYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGSLFHNGRNYHVSNTKNNDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSLEELASYVKAVANDPVAYAEYHAWRRCGVLGNYGNTRAVSLDTLPCRLCEAVSRKGGRNARS. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07184 407 PIRSF FucT_plant 3 407 IPR017177 -
Seca8g07184 407 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 107 399 IPR001503 GO:0006486|GO:0008417|GO:0016020
Seca8g07184 407 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 400 IPR001503 GO:0006486|GO:0008417|GO:0016020
Seca8g07184 407 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 399 - -
Seca8g07184 407 Gene3D - 170 374 IPR038577 -
Seca8g07184 407 FunFam Alpha-(1,4)-fucosyltransferase 169 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07184 Seca-Chr8 168076811 168080657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07184 3 405 Xyloglucan Fucosyltransferase1 AT1G71990 68.227 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07184 K14412 - gmx:100791990 717.998