Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07019 ATGAAGAACATCAAGGCTATTAGTATTACCACTTTTGTTATGTTCATCCTCTATCTGAGTGGAAGGTGCTGTGGACAAGAAGACCTTGATATAGCTCCAATGGAGAAAACAGAGCAGGAAGCTCTATACTCTACCATTCAAGGCTTTGTTGGTAATTCATGGAATGGCTCAGATCTCTATCCAGATCCCTGTGGTTGGACTCCTATTCAGGGAGTCTCTTGTGATCTGTTTAATGGATTTTGGTATGTTACTGTCTTGAACATTGGTCCCATCCATGACAATTCTCTGAGTTGTGCTCAACATTTGGAATTCAGACCAGAGTTATTTGAGCTGAAGCACCTGAAATCTCTATCCTTCTTCAATTGTTTTCAATCACAAAACAGGCTTTCAGTTACCATCCCCACTGGAAACTGGGAAAAACTGGCTGGCAGTTTAGAATCACTGGAGTTTAGATCAAACCCAGGTCTCATTGGAAGCATTCCATCAAGTTTTGGAGCTCTCAAGAACCTTCAGTCATTAGTATTACTAGAAAATGGTTTAACAGGTCAAATACCACCAGACATTGGCAATCTTATCAAGTTGAAGAGGCTGGTTCTTGCTGGAAACTATTTTTCTGGGAGGATTCCAGATATTTTTGGTGGGTTAAGAGAGTTATTAATCTTTGATTTAAGCAGAAATTCATTCTCTGGGACTTTGCCTTTGACACTTGGAAGCTTGACTTCAGTATTGAAGCTTGATTTAAGCCACAACCATCTAAAAGGGAATCTGCTAAATGAATTTGCTAATCTTAAGAATCTGACCCTTATGGACCTTAGGAATAACAGATTCTCTGGTGGGTTGACCATGTCTTTTGAAGAGATGTATTCCTTAGAAGAAATGGTTTTGTCCAACAATCCATTGGGTGGAGACATCAGGGCCTTAAAGTGGGAAAACCTTCAGAACTTGGTCATTTTGGATCTCTCTAACATGGGGTTGACAGGGGAAATTCCTGAGTCTATATCAGAATTAAAGCAATTGAGATTTTTGGGACTTAGTGACAACAACCTCACAGGCAACCTATCACCAAAGCTAGAAACCCTCCCTTGTCTCAATGCACTCTACCTAAGTAGAAACAATCTTACAGGAGATCTTAAATTCTCCAAAGAGTTTTATGGAAAAATGGGAAGACGTTTTGGGGCCTGGAACAACCCCAACCTTTGCTATCCAGTTGGAGTAATGTCAACAAACCATATTCCATATGGGGTAAAACCATGCCAGAAAGAGGTCAATTTGCTAGAATCTAATACAAAAAATGGGCTTCTCAATGCAGATATGAACAAGACTTCCCATTTCATAACCTCTATGGGATTTTCTAGTTGTGCTCCTAATGGTTTCTGGTGGACTTTTCTGGAAGAAATATTGATGATTGGTCTATTCCTAAATTCTTATATAGCTCTTTAA 1440 0.3944 MKNIKAISITTFVMFILYLSGRCCGQEDLDIAPMEKTEQEALYSTIQGFVGNSWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTVLNIGPIHDNSLSCAQHLEFRPELFELKHLKSLSFFNCFQSQNRLSVTIPTGNWEKLAGSLESLEFRSNPGLIGSIPSSFGALKNLQSLVLLENGLTGQIPPDIGNLIKLKRLVLAGNYFSGRIPDIFGGLRELLIFDLSRNSFSGTLPLTLGSLTSVLKLDLSHNHLKGNLLNEFANLKNLTLMDLRNNRFSGGLTMSFEEMYSLEEMVLSNNPLGGDIRALKWENLQNLVILDLSNMGLTGEIPESISELKQLRFLGLSDNNLTGNLSPKLETLPCLNALYLSRNNLTGDLKFSKEFYGKMGRRFGAWNNPNLCYPVGVMSTNHIPYGVKPCQKEVNLLESNTKNGLLNADMNKTSHFITSMGFSSCAPNGFWWTFLEEILMIGLFLNSYIAL. 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07019 479 Gene3D Ribonuclease Inhibitor 35 208 IPR032675 -
Seca8g07019 479 SUPERFAMILY L domain-like 43 378 - -
Seca8g07019 479 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 110 403 - -
Seca8g07019 479 Gene3D Ribonuclease Inhibitor 209 307 IPR032675 -
Seca8g07019 479 FunFam Piriformospora indica-insensitive protein 2 209 305 - -
Seca8g07019 479 FunFam Piriformospora indica-insensitive protein 2 306 407 - -
Seca8g07019 479 FunFam Piriformospora indica-insensitive protein 2 37 208 - -
Seca8g07019 479 Gene3D Ribonuclease Inhibitor 308 403 IPR032675 -
Seca8g07019 479 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07019 Seca-Chr8 165855660 165858007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07019 144 418 Receptor kinase-like Gene Family AT4G08850 31.636 1.20e-23 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07019 8 165855660 165858007 Seca8g07019 8 165855660 165858007 ECH