Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07004 ATGATATTCATACTACCCCACTCCTTCTTCTTCTTCTTCTTGTGCTTGTTATTGTGCATCACTAACACCACCTCCACACCATCTCCACCACCCTACCCCTACGGTTTCTCTTACCACATCAACTGCGGAACTTCCACCAACACCACTGATCCCTTCAACACCACATGGCTCTCCGATCGCTTCTCCACTGGCGGCTCCACCTCCGTCGTATCCGAACCCCTCCGCTTCAAACTCCCCTCTGAAAAAACACTCCGCTTCTTCCCTTCCTCCTCCTACGGGAAAAAAAACTGCTACTCCTTCCCTTCTCTCCCCTCCGGCCGCTACCTCCTTCGCACCTTCACCGTCTACGACAACTACGACGCCAAGTCTCGCCCTCCTTCCTTCGACGTCTCCCTCTCCTCCACTATCCTCTTCAGCTGGCGCTCCCCCTGGCCTGAATCCACCGCCCGCGACGGCGCCTACTCCGATTTCTTCGCATTCCTCAATGCCACCGCCGATCTCTGTTTCTATGGCTTCGCCACCGACGCTCCTATCGTCTCCTCCGTGGAGCTCGTCCAGGTTGATTCTTCCTCCTACGATTCCCTCTCCACCGGAGATAACCTCTTCCTTGTCAATTACGGTCGTATTTCATGCGGCTCCGACGACCACTGGGGCTCTGGCTTCACCAACGACACTGACCGGTTCGGCCGCTCCTGGCAGCCTGACTCGGCATTCCGAACCGGACCGGACGGTTCCGTCCAATTCGTGTCGACGGAAAACACCGTGACCGGTGCCGACGGGGAACCTAACTATTTTCCGATGAAGCTGTACCAGCAGGCGGTGACGACGGAGGAGGACGCGTTGGAGTTTGAATTGGGTGTGGACGCGAAGATGGATTATATGGTGTGGCTACATTTTGCGGAGATTGATTCCACCGTGAAGAAAGCAGGGGAGAGGGTGTTCGATGTGATCATCAATGGCAACAACTTGAGCAGGGTGGATATATATAAGGAAGTGGGAGGTTTTGCTGCGTTCACTTGGCATCACATTGTGAAGAATTTGAGTACTAACGCTTTGAGTATCAAGCTTGTTGCTGTTTCTGGTGCCCCTCTCATTAGTGGCATTGAGAATTATGCTTTGGTCCCCAATGAACCTTCCACGCTCCCTCTCCAAGTAAGTGCCACGAAGGCATTGAAGGACTCGCTTCGTGTTCCGGATAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTACTTGGGATGCTTGGGAGGGTGTTACCTGCCGCATGAGTAACGATAAAACTGCTCTCATCATTACTGAAATAGATCTTGGCAGTCAAGGTTTGAAAGGGTACATAAGTGACCAGATTAGCCTTTTGACAGACTTAGTAAGCCTGAACCTGAGTTCCAATTCCTTGGTGGGTGAAATACCTTCGGGACTAGGTCAAAAATCCCTGATGCAAGTGGATTTGTCCAACAATCAGTTAACGGGCTCCATACCTGATAGTTTGGCATATTCGAGTTTGAAGCTTGTGCTATTGAATGGTAACTTATTGGAAGGACGAGTTCCAGAGCAACTTTATTCAGTTGGTGTGCACGGTGGAGCTATTGATCTGTCTGGCAACAAGGGTTTGTGCGGTGTACCATCTCTGCCATCATGTCCTATGTTTTGGGAGCACGGCAGATTATCAAGTCGGGGTAAACTTGCAATAGGCTTGTCATGTCTTTCTGTTTTCTGTGCGGTGCTGCTGGTGGTATATATCTACATCAGAAGGAAAAGAAATGATTATGACTTTGGTCTGCCTCATGAATTAGTGGCTTTAGCGGCCAAGAGAAACCGATATCAGAGGCAGAAATCGTTGATGCTCCTTGAGCTGGAGAGTCAACACGCCAAGGGATTTCCTTCACCTTTTACTCCACAGTAA 1905 0.5055 MIFILPHSFFFFFLCLLLCITNTTSTPSPPPYPYGFSYHINCGTSTNTTDPFNTTWLSDRFSTGGSTSVVSEPLRFKLPSEKTLRFFPSSSYGKKNCYSFPSLPSGRYLLRTFTVYDNYDAKSRPPSFDVSLSSTILFSWRSPWPESTARDGAYSDFFAFLNATADLCFYGFATDAPIVSSVELVQVDSSSYDSLSTGDNLFLVNYGRISCGSDDHWGSGFTNDTDRFGRSWQPDSAFRTGPDGSVQFVSTENTVTGADGEPNYFPMKLYQQAVTTEEDALEFELGVDAKMDYMVWLHFAEIDSTVKKAGERVFDVIINGNNLSRVDIYKEVGGFAAFTWHHIVKNLSTNALSIKLVAVSGAPLISGIENYALVPNEPSTLPLQVSATKALKDSLRVPDRMGWNGDPCAPTTWDAWEGVTCRMSNDKTALIITEIDLGSQGLKGYISDQISLLTDLVSLNLSSNSLVGEIPSGLGQKSLMQVDLSNNQLTGSIPDSLAYSSLKLVLLNGNLLEGRVPEQLYSVGVHGGAIDLSGNKGLCGVPSLPSCPMFWEHGRLSSRGKLAIGLSCLSVFCAVLLVVYIYIRRKRNDYDFGLPHELVALAAKRNRYQRQKSLMLLELESQHAKGFPSPFTPQ. 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07004 634 FunFam Putative LRR receptor-like serine/threonine-protein kinase 383 548 - -
Seca8g07004 634 PANTHER OS07G0107800 PROTEIN-RELATED 39 603 - -
Seca8g07004 634 SUPERFAMILY L domain-like 386 522 - -
Seca8g07004 634 Gene3D - 207 372 - -
Seca8g07004 634 Gene3D - 35 188 - -
Seca8g07004 634 Gene3D Ribonuclease Inhibitor 385 549 IPR032675 -
Seca8g07004 634 Pfam Malectin-like domain 40 372 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07004 Seca-Chr8 165660393 165666083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07004 33 506 Receptor kinase-like Gene Family AT5G59670 28.858 8.42e-34 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07004 8 165660393 165666083 Seca8g07004 8 165660393 165666083 ECH