Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03970 ATGGCTCGTACGAAGCAAACCGCTCGTAAATCTACCGGTGGTAAGGCTCCGAGGAAGCAACTCGCTACCAAGGCTGCAAGAAAATCTGCTCCCACAACCGGTGGAGTCAAGAAGCCTCATCGTTATCGCCCTGGAACCGTTGCTCTTCGTGAGATCCGAAAATACCAGAAGAGTACTGAGCTTTTGATCCGCAAGCTTCCCTTCCAGCGTCTTGTTCGTGAAATTGCTCAAGACTTCAAGGTGCGTGTTGTATTGGAAATCTATTTTACTGATTTGAGGTTCCAGAGCCATGCTGTTCTTGCTCTCCAGGAGGCTGCGGAGGCGTATTTGGTGGGTTTGTTCGAGGACACCAACTTGTGTGCTATTCATGCCAAGAGGGTGACCATCATGCCCAAGGACATTCAACTTGCTCGGAGGATCCGTGGCGAACGTGCTTAG 438 0.5068 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKVRVVLEIYFTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03970 145 PRINTS Histone H3 signature 17 31 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 PRINTS Histone H3 signature 58 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 PRINTS Histone H3 signature 34 55 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 FunFam Histone H3.3 53 145 - -
Seca8g03970 145 ProSitePatterns Histone H3 signature 1. 15 21 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 SMART h35 34 145 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 SUPERFAMILY Histone-fold 2 142 IPR009072 GO:0046982
Seca8g03970 145 ProSitePatterns Histone H3 signature 2. 67 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 MobiDBLite consensus disorder prediction 1 43 - -
Seca8g03970 145 PANTHER HISTONE H3 1 143 IPR000164 GO:0000786|GO:0003677|GO:0030527
Seca8g03970 145 Gene3D Histone, subunit A 2 145 IPR009072 GO:0046982
Seca8g03970 145 FunFam Histone H3 2 50 - -
Seca8g03970 145 Pfam Core histone H2A/H2B/H3/H4 1 141 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03970 Seca-Chr8 114247609 114248469 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03970 8 114247609 114248469 Seca8g03970 8 114247609 114248469 ECH