Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03898 ATGGAAACGGTGGAAGTACTTCACATGAACAAAGGAGCAGGCGAGACTAGCTATGCCATGAACTCTGCCGTTCAGAACAAGATTATCTCTGTGACAACTCCAGCAATAAAGAAAGCAATTGTGCAAATTCTATGCTCAAGTTCGCCAGTGATCAAGATGGGCATTGCTGACTTGGGTTGCTCTTCTGGGCCCAATGCGTTAAGGGTAATTTCGGAGATAGTGGATGCTGTATATGCCACCTCACGCGTGTTAGATCGTCCAGTACCGGAAATGGTTGTGCATTTAAACGACCTTTTCACGAATGACTTCAACAATATCTTTGGTTCATTGCCATCATTCTACAAAAAACAGAGGCAGGAAAAGGGAATTAGTGGATTTGGGTCTTGTTTCATTTCCGCTGTACCAGGCAGTTTCTACGGTCGGCTTTTCCCAAGCAACAGCCTCCACTTTGTGCACTCTTCTTCCAGCCTCCATTGGCTTTCTCAGGCTCCTATTGTTTTGGAGGATGATTGGGAGAGAGGAGAACTGATGAACAAGGGAAAGATCTACATATCAAAGAGTAGTCCCCAGCGTGTGCTAGATGCTTATTCGCAGCAATTCCAGAATGACTTTTCACAGTTCCTAGAGTCACGTTCTCAAGAATTGATTTCTGGGGGACGGATGGTTCTGTCTCTCATGGGAAGGATATCCAAAGACCCAACAATCGCCCATAGTTGCTATCAGTGGGAACTGTTAGCACACGCTCTCATGAGCATGGTTTCAGAGGGTCTTGTTGAAGAGGAAAAGGTGGACTCTTTCGACGCTCCTTACTATGCACCCTGCTTAGAGGAATTGAAGTTGGAGATTGAAAAAGAAGGGTCATTCATGGTGGTTGGCCATGAAGCTTATGAAATCGATTGGGATGATGGAATGGAATTGCAGAGTTGTTCACTATCGAGTGGAGAGAGAGTGGCGAGGACCATAAGGGCTGTCGTTGAGTCCATGCTGGAATCCCATTTCGGAAGTCATATAATGGATGAGCTTTTTCGAAGGTATGCCCAACTTGTGGAGGACCATTTGTCCAAGACTAGGACCAAATACATCAATTTGGTTATTTCTCTTGTCAAACAGGACTGA 1116 0.4525 METVEVLHMNKGAGETSYAMNSAVQNKIISVTTPAIKKAIVQILCSSSPVIKMGIADLGCSSGPNALRVISEIVDAVYATSRVLDRPVPEMVVHLNDLFTNDFNNIFGSLPSFYKKQRQEKGISGFGSCFISAVPGSFYGRLFPSNSLHFVHSSSSLHWLSQAPIVLEDDWERGELMNKGKIYISKSSPQRVLDAYSQQFQNDFSQFLESRSQELISGGRMVLSLMGRISKDPTIAHSCYQWELLAHALMSMVSEGLVEEEKVDSFDAPYYAPCLEELKLEIEKEGSFMVVGHEAYEIDWDDGMELQSCSLSSGERVARTIRAVVESMLESHFGSHIMDELFRRYAQLVEDHLSKTRTKYINLVISLVKQD. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03898 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 358 IPR005299 GO:0008168
Seca8g03898 371 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Seca8g03898 371 Pfam SAM dependent carboxyl methyltransferase 39 369 IPR005299 GO:0008168
Seca8g03898 371 Gene3D - 6 356 IPR042086 -
Seca8g03898 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 370 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03898 Seca-Chr8 112290004 112294561 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03898 8 112290004 112294561 Seca8g03898 8 112290004 112294561 ECH