Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03897 ATGGCGAACTGTGTAACCAACACCTTTGTGCAAGGAAAACCTTTCCTTCCAGTTCCCACAAAAAATGTAATTTCAAATTCCGTTAAGAGAGTGGGGAATAGCGGAGTGTGGTGCAGGAAGAAAGACATACACCCGAAATTCTACCAAGACGCGAAGGTATACTGCAACGGAGAACTGGTTATGACGACGGGTGGGACGAAGCAGGAGTACGTGGTGGACGTTTGGTCAGGGAACCACCCTTTCTACCTCGGAAACCGTTCGGCAGTTATGGTGAGCGATGACCAGGTGGAGAAGTTCCGGAAGAAGTTCGGTCAGCTTTCAGAGATTATGGAGATTCCTGTTCTCAAAGGAGAGATTGTCATTCCCTCTAGGCGCAAGGGAATCAAGGGAGGCAAGAAGAAGTAG 405 0.4864 MANCVTNTFVQGKPFLPVPTKNVISNSVKRVGNSGVWCRKKDIHPKFYQDAKVYCNGELVMTTGGTKQEYVVDVWSGNHPFYLGNRSAVMVSDDQVEKFRKKFGQLSEIMEIPVLKGEIVIPSRRKGIKGGKKK. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03897 134 Gene3D Ribosomal protein L31 40 107 IPR042105 -
Seca8g03897 134 PANTHER 50S RIBOSOMAL PROTEIN L31, CHLOROPLASTIC 1 133 IPR002150 GO:0003735|GO:0005840|GO:0006412
Seca8g03897 134 Pfam Ribosomal protein L31 40 104 IPR002150 GO:0003735|GO:0005840|GO:0006412
Seca8g03897 134 NCBIfam 50S ribosomal protein L31 40 105 IPR002150 GO:0003735|GO:0005840|GO:0006412
Seca8g03897 134 PRINTS Ribosomal protein L31 signature 40 57 IPR002150 GO:0003735|GO:0005840|GO:0006412
Seca8g03897 134 PRINTS Ribosomal protein L31 signature 69 84 IPR002150 GO:0003735|GO:0005840|GO:0006412
Seca8g03897 134 SUPERFAMILY L28p-like 40 106 IPR034704 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03897 Seca-Chr8 112275289 112275770 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03897 8 112275289 112275770 Seca8g03897 8 112275289 112275770 ECH