Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03888 ATGGAATTGGGAGGCGCCACCGCGACTCTCACGAAGAAGCTCTCTAACGGCTATGGCGTCTCCGGAAGATCCGCGTACGACGGCGTTTTTGCTACTCCGGTTAAGCGCAGAGCTGGTTTCTCTTCTCAATTGGACGATTATCGCGAGATTTTCTGTGGCTCGGAAGCTTCCGTCGGTTCCTCGATTCCGATTCTCGAACTTCCGGAGCTCAACGAGAGGAGAGCGACGGATGATGCTCGGCGCTCGAAGCTCGATTACTCGAAGGTCTTCGGCGGTTTCGGTAATGTAGACTCTGCTGTGTCATTTGAGGAGTTGGTTGCTCAGCCTAAAGAGAAAGACAGTTTCACCAGCGGAGCATCGGCACGGAACAAGGTTAAAAGCACAAACCAATCTAGCCAGGAAGATCATACCAATTGTTCAAAGGAAATTCCAGTGGTGTCACAGTCATCCAATAATGCCAAAAGGATCAATATGTCATATCATAAAGTTAACCAGGGAAGTGAAAATGGAACAAATGGGACAACACATATAGCTCAACTCCATGCTGTCCCTGCTTATACTTGTTTAGTTGAAGAAGTGAAACCAGTGAAGATGAACAGATCTAAAACGTCTATACCAGCAGCACAGGATACTTATCGTGGGAGTCATTGTAATGAGGAGATAAAGGAACGTGGACGTCGTACTAAATCATTTAGTGGTCCTTCACCTGATATTGCTAAGAAACAGTCTTCAAGCAATGGAGTGAAAATTAAAAATAGATCTGATTCTGTTGACCTGTTTTATGATGCATGTGAGATTAGCAATGAAAGTAATGGAACACATCACGCCAAAGACAAAAGTGGTAGCCGTTCTGATGAGGGGATAAAGGAAGGTGGACGTTGTACTAAATCGTTTACTGGTCCTTCACCGGATAATGCTGAGAAACAGTCTTCCAACAATGGAGTGAAGGTTGAAAATAGATCTGATTCTATTGACCTGTTTTATGATGCATGTGAGATTAGCAATGAAGGTAATGGAACACATCATGCCGAAGTTCATCCATCAGAGACTGTGGCAGATAAATTGGATAATCATAATTCTGATGCTATAAGATCTATGGCAACCAAAGGCCAGGAATCTCAAAGTGGCACATCTGAAGGTGCAGCTGGTGCTGATTCACCGTCATACTCAGATGACATGGTAGACTCAAATTCAGCGGCAGCTGCTTCTGTAGCTGCTTTAAGGAAGGCAATAGAAGAGGCTCAAGTAAGAATGAAGGTTGCAAGGGAATCCATGAGAAGAAAGAAAGAAGGGTTTCCTGATCGTATCAAACGGAAGTCTAATATTGACTTGAAAGCTGGGGTAAAGAAGGAGGCTGAACTTGCATGTAAAACAACGAAACCTGAAGAGATTAATACAAGGCAAACATTTGGAGAAACTGATGCTTTGCCTCAAGTTTCTTCTGAGGTAGGAAAGCCTATGATGAGAGTAGAGCAAGTAAGACCAGATCTTGGGACTAAAGAAATGTGTGTTGCTAAAGAATCTGTACAAGAAGCACAGAAGAAATTGAAATCATCTCAAGCAGAACATATGGAAGAGGTTGAACAGAAAGAAGCAGATCGTAGAGGAAAAGTTCTTGAGCTTAAAGAGGCAGAAAATACTAAGGAAGTGCTGTATAGTAAAAACACAGGCAGGAATGCCTCTGAGAAACCAGAGGAATCTGATCATACAATAGAAGTGGTTAAGGAATATTGGCAACGGGAGAATAATGAAGAAAAGGTCCATGTGGATAATGAAGAAAGTGCTTGTGAAGAACCTGTCCATGAAACTACACATAGGTATCAAGAAGTTGCAGATGAAACAAAACTGATTGAGGAGACACTTGATAATGGAATATCTGACAAGAGAGTGAAGGTTAATGAAGATGGAGAAGTTCAGAACAAGGTTACACCTTTTCATGAGCCAAAAGACTATGAAAGTAACCTGGGTGGGCAAGGGTTAGTAATGGGAAATGAAAAAATGGATGATTGCAAACCAGAAGATGGTAAAAAGGTTGAAGAGTACTTTGAGCTGGAAGAATGTCAAAAAAGCTTGAGAGCTATTCGGCATCTGGGAGAAGGCGAGAAGAACATTGCTCAAGAGCAAAAAGGAAGTGAGGATGAAGTTGAAGTGTGTAGTGATCTGGAGGAATGTGAATTGACAGACTTTCTGCAACCAATAGACAATGAGAGAGTATGCAGTCCTCATGGCTCAAACTTAACAAGTATGGAGAAAGAAATAGAGAACTTGGGGTGTTTAGGGGATAGAAAGAGGAGTGAATCTAGTTTTCAGGATATAAATCAAGAGACAGAAAATTGCTATCATAGAGAAGCCACTGATAATACGTTTAGCAATATCTATGTGCAGGAAATACTGGAGGGTAATGTGGACCATATTCATGCTGATGAAGAAATTTATCAAAGAAATACAAAGGATGGTGAATTAGATGGAGATGGGAGGGTTCAAGATGCCCAAGCAAGTGAGAATGAACTTAAAGGAGCCACACATCTGATGGAAGAAAATCAGAGGGAAAGGGAAGATAACAAGGTAGAAGTTATTAACGTGACTCAAACTGATTCTAACTATGGAGAGATCAAAGGAAAGGAAGCTGACAATAGTGCAGAAACCAGTTCTTGCTATGAGCCAGATGAAACTGAAAAGTTGAGCAAAGCTCAGGCGGCTGATACAATTATTGAAAATGATGAAACTCCTGATGTAACACCGGAGGGTTATTCATGTGATGTGCAGGATGATACAGTGGTAGCAAGTAATGCTTCATCTCAGCATCGAGGTGCCCTTGAACTCGATGAAACAGTAAATCAAATGCAAAATACATTTGAAACAGTTACCTTCAAAAGTGCTGCCACAAATATTGGTGAAACTGACATGAAGGTTAGGCAAAACCAAGATCAGTGCTTGGAAGAAGCAGAAGATGACTGCAATCGGCCAATGCTTGTTGAAGAAACAACTCCTGAGTCTGAAGAACTATGTAAGGATGCAAAGGAGGCTAGAGTTGCTACAAATATTGGGGAAACTGACATGAAGGCTAGGCAAAATCAAGATCAGTGCTTGGAAAAAGCAGAAAATGACTGCAATGCAGCGATGCTTGTTGAAGAAACAACTCCGGAGTCTGGAGAAATATGTAAGGATGTAAAGGAGGCTAGAGTTGCATCAGATGAAGAGATAGATGAGAATCAATCTAACTCCTCTAATGAGGAAAGTTTGTTTGACAATGAACATAATATAGAAGCATCACAGATACCTAGTATGTCTGAATGGAAATCAAGCTCCTTTAAAGAAGAGGAGGTTAAATCAATTCACAGCAATCTAAAGGAGAGTCATCAAGCATCCATGACAACAGAGGAGAAGGAAGCCGATGGTAATTCTCAAAAGGTAGAGCTGGAAAAGGAACACCGCAGAAAAATTGATGAAGCAAAAGAGAGGGAAAGAGAAAGAGAAAAGGAGAAATTAGCAGTAGAAAGAGCAATTCGTGAAGCTCGTGAAAGGGCATTTGCTGGTGCTAGAGAAAGGGCGGCATTAGAGAGAGCTGCTGCTGAAGCACGTCAGAAAAACATTTCTGATGGACGAGAAAGGCTAGGAAAATCCACTAGTCAGGCAAATGAGAAGACACCGGCTGAGAAGGCTGCTATGGAAGCAAAACTTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCACGGGCACGTGCCCTGGAAAGGGCATTGTCAGAGAAGGCTGCCTCTGAAGCAAGAAATAAATCTGACAAGTCTGTTGTGGAGAAGAACCTTGGAATGAAGCAAAACTTACATTCAAAATCTTTCAGCTATGGTGAAGTTCGTGATTCTACTGATGTATTTGATGGAGCTGGTGGTGATTCTGCCCAGAGATGTAAAGCTAGGTCTGAGAGGCATCAGAGAATAGGGGAACGAGTGGCAAAGGCCCTTGCAGAAAAGAATATGCGTGATTGGCTTGTGCAGAAAGAGCAAGAGGATAGAAATTCTTATTTCCTGCAGAGGGTAGCCGAAGCTCTCGATGCTGATGTTAAAAGGTGGTCAAGTGGGAAGGCAGGAAACTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGGCCTGATAGTGGTTGGCAACCGATTCCTTTAACAGATATAGTAACCACAACTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTTTGTGCATCCTGACAAGCTGCAGCAGCGTGGAGCAAGCATTCAACAAAAGTACATTTGTGAGAAGGTTTTTGATCTTCTAAAGGGCACTAAGAAGCTTGGAACAGATTCAACATGGAAGAACGGTGAACAGTACTTGGTGTCATGCTGCCTGATGGCAATGCGGATGGCGGTGACAATTCTTTGA 4407 0.4225 MELGGATATLTKKLSNGYGVSGRSAYDGVFATPVKRRAGFSSQLDDYREIFCGSEASVGSSIPILELPELNERRATDDARRSKLDYSKVFGGFGNVDSAVSFEELVAQPKEKDSFTSGASARNKVKSTNQSSQEDHTNCSKEIPVVSQSSNNAKRINMSYHKVNQGSENGTNGTTHIAQLHAVPAYTCLVEEVKPVKMNRSKTSIPAAQDTYRGSHCNEEIKERGRRTKSFSGPSPDIAKKQSSSNGVKIKNRSDSVDLFYDACEISNESNGTHHAKDKSGSRSDEGIKEGGRCTKSFTGPSPDNAEKQSSNNGVKVENRSDSIDLFYDACEISNEGNGTHHAEVHPSETVADKLDNHNSDAIRSMATKGQESQSGTSEGAAGADSPSYSDDMVDSNSAAAASVAALRKAIEEAQVRMKVARESMRRKKEGFPDRIKRKSNIDLKAGVKKEAELACKTTKPEEINTRQTFGETDALPQVSSEVGKPMMRVEQVRPDLGTKEMCVAKESVQEAQKKLKSSQAEHMEEVEQKEADRRGKVLELKEAENTKEVLYSKNTGRNASEKPEESDHTIEVVKEYWQRENNEEKVHVDNEESACEEPVHETTHRYQEVADETKLIEETLDNGISDKRVKVNEDGEVQNKVTPFHEPKDYESNLGGQGLVMGNEKMDDCKPEDGKKVEEYFELEECQKSLRAIRHLGEGEKNIAQEQKGSEDEVEVCSDLEECELTDFLQPIDNERVCSPHGSNLTSMEKEIENLGCLGDRKRSESSFQDINQETENCYHREATDNTFSNIYVQEILEGNVDHIHADEEIYQRNTKDGELDGDGRVQDAQASENELKGATHLMEENQREREDNKVEVINVTQTDSNYGEIKGKEADNSAETSSCYEPDETEKLSKAQAADTIIENDETPDVTPEGYSCDVQDDTVVASNASSQHRGALELDETVNQMQNTFETVTFKSAATNIGETDMKVRQNQDQCLEEAEDDCNRPMLVEETTPESEELCKDAKEARVATNIGETDMKARQNQDQCLEKAENDCNAAMLVEETTPESGEICKDVKEARVASDEEIDENQSNSSNEESLFDNEHNIEASQIPSMSEWKSSSFKEEEVKSIHSNLKESHQASMTTEEKEADGNSQKVELEKEHRRKIDEAKEREREREKEKLAVERAIREARERAFAGARERAALERAAAEARQKNISDGRERLGKSTSQANEKTPAEKAAMEAKLKAERAAVERATAEARARALERALSEKAASEARNKSDKSVVEKNLGMKQNLHSKSFSYGEVRDSTDVFDGAGGDSAQRCKARSERHQRIGERVAKALAEKNMRDWLVQKEQEDRNSYFLQRVAEALDADVKRWSSGKAGNLRALLSTLQYILGPDSGWQPIPLTDIVTTTAVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKGTKKLGTDSTWKNGEQYLVSCCLMAMRMAVTIL. 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1192 1209 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 517 537 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 298 318 - -
Seca8g03888 1468 Coils Coil 1137 1171 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1250 1268 - -
Seca8g03888 1468 SUPERFAMILY Chaperone J-domain 1302 1435 IPR036869 -
Seca8g03888 1468 Coils Coil 1220 1249 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1101 1115 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 269 318 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1192 1220 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 111 152 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 271 292 - -
Seca8g03888 1468 Coils Coil 830 850 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 549 570 - -
Seca8g03888 1468 Coils Coil 1468 1468 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1122 1162 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 201 251 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1058 1162 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 215 230 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 367 395 - -
Seca8g03888 1468 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 808 1435 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1294 1313 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 113 152 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 869 893 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1250 1272 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 235 251 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 1074 1100 - -
Seca8g03888 1468 Coils Coil 509 547 - -
Seca8g03888 1468 MobiDBLite consensus disorder prediction 583 613 - -
Seca8g03888 1468 Coils Coil 404 424 - -
Seca8g03888 1468 Gene3D DnaJ domain 1344 1439 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03888 Seca-Chr8 112064018 112071380 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03888 8 112064018 112071380 Seca8g03888 8 112064018 112071380 ECH
Seca8g03888 8 112064018 112071380 Seca4g00574 4 9345206 9352409 PCT