Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03794 ATGCGAAGAGAACAATCCAAGCCTCCTTGCCTAACAGATGTGGAGCCAGATAGAATCAGTTGCTTACCAGGTCATGTAACAGACCAGATTCTTTCACATTTGCCAATTAGGGAAGCAGTGAGAACAAGTGTTTTATCCAGCAAATGGAGGTACAAATGGGCCACACTACCAAATCTTGTGTTTGACAACCGATGTATCTCTGTAGCTTCCCAAGACCATACAGTTATCAAGAACAAGCTTTTGAGAATTATTGATCATGTACTTTTACTTCATTCTGGTCCAATCAACAAGTTCAAGCTCTCCCATCGCGATCTCATTGGTGTGGTTGATATTGATCGTTGGACTCTTCATGTATGCAGAAGGTCTATTAAAGAGTTTGTGCTGGAAATCTGGAAAGGGCAGCGCTATAAGATACCCTCGTGCTTATTTTCTTGTCAAAGTTTAACTCATTTAGAACTATTTAATTGTTGGCTTAAACCTCCATCAACATTTCAAGGCTTCAGGAACTTGAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAAGATGTTTTTGAAAACTTGATATCCAGCTGCCCTGTGCTTGAACGATTGACATTGATGAACTTTGATGGTTTCACTCATCTTAATGTTAATGCACCAAATCTCCAGTTTTTTGACATTGGAGGTAAATTTGAGGATATTAGCTTTGAGAACACTTTCCAATTAGCTGTGGTATCAATTGGTTTGTACTTAAACTTTGAAAACAATCAAAGTAGATTGCATGGAGGTTCTAGCAATTTGCTCAAATTTTTTGTTCATCTACCCCGCTTACAAAGGCTAGAGATTCAAAGCTATTTTCTAAAGTATTTGTCAGTAGGGGGTGTGCCAGTAAAGCTCCCTATACCTTGCATTGATCTAAGTTATCTTTCCATACGCATAAACTTCAATGATTTGAAGGAAATTTCAGCTGCTCTTTGCCTGTTAAGAAGCTCACCTTATCTGCAAGAACTAGAAATATTGGCTCGACCTGAGGAGCAGACTGTTCTGTCAACACATACCTATTGTTGGGAAGATGTCTATTTGGATTTTCCAGACTTGCCACTGCGATATGTGAGGATAGATGGTATCTCTGGGATCAAACCTGAATTAGATTTTATCAGATTTCTACTGCTACATTCTCCTGTGCTAGAAAGGATGAATGTGAAGCCTGTTTTAAACGTTGGATCAGAGTTGACAAAAGAATTATTGCGGTTTCGGAGAGCCTCAGGACAAGCTGAAATTATTTACCTGGATCCTTCATAA 1284 0.391 MRREQSKPPCLTDVEPDRISCLPGHVTDQILSHLPIREAVRTSVLSSKWRYKWATLPNLVFDNRCISVASQDHTVIKNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVVDIDRWTLHVCRRSIKEFVLEIWKGQRYKIPSCLFSCQSLTHLELFNCWLKPPSTFQGFRNLKSLDLQHVTLAQDVFENLISSCPVLERLTLMNFDGFTHLNVNAPNLQFFDIGGKFEDISFENTFQLAVVSIGLYLNFENNQSRLHGGSSNLLKFFVHLPRLQRLEIQSYFLKYLSVGGVPVKLPIPCIDLSYLSIRINFNDLKEISAALCLLRSSPYLQELEILARPEEQTVLSTHTYCWEDVYLDFPDLPLRYVRIDGISGIKPELDFIRFLLLHSPVLERMNVKPVLNVGSELTKELLRFRRASGQAEIIYLDPS. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03794 427 SUPERFAMILY F-box domain 16 71 IPR036047 GO:0005515
Seca8g03794 427 Gene3D Ribonuclease Inhibitor 86 340 IPR032675 -
Seca8g03794 427 SUPERFAMILY RNI-like 121 333 - -
Seca8g03794 427 PANTHER F-BOX PROTEIN-LIKE 17 398 - -
Seca8g03794 427 Pfam Leucine Rich Repeat 169 193 IPR013101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03794 Seca-Chr8 108662076 108664906 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03794 8 108662076 108664906 Seca8g03794 8 108662076 108664906 ECH