Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03764 ATGGCCCTGAACGATTTCTTCGCCGGCGAGATTGCGACGGAGCTTCTAAAAATGCTTATTAACATTTCTCGAAAGTCCCTTCTATGCAGAACAAGCGCCGACCAACTCATCACCTATATCAACGAGCTCCTTCCCACCATCGAAGAAATCAAATACTCCGGCGTCGAGCTTCCGGCGCCACGTCAGTCACAGCTCAATTGCCTCTCCGAGATTCTCCGTTATGGCGTCGAGCTCTCCCACAAGGTCCTTTCCTCAAGCCGCTGGAATGTCTATAAGAATTTGCAGCTCGCGAAGAAGATGGAGAAGCTCGAGAAGAACGTGTCACGGTTCATGCAGGGTCCCATGCAGGCCAATATACTTGCTGATGTCCACCACACCCGGTTCGAGATGGCTGAGCGGTTCGACCGGGTTGAAGCCTCGAACCGACGGTTGGAGGAGTATTTTGGCGCCATGAAGATTGGGGTTGGCGGGGGTGGGTGGGTGGAGGAGGCTGTGAGGAGTATGGAGGTGGATGAGACTTGGGTTGAGGGTAGTTCTGGGAATTTGGGTGTAGGTTTGGATTTGGGGAAGAACAAGGTTAAGGAGATGATTGTTGGAAGACAGGATCTTTGGGTTGTTGGAATTTCTGGGATTGGTGGATCAGGGAAAACCACTCTTGCCAGAGAAGTCTGCAGAGATGAACAAGTTCGATGTTATTTTAAAGAGAGAATCTTGTTCCTGACTGTCTCGCAATCCCCAAATGTGGAGCAGCTCAGGACAAAGATTTGGGGTTATGTTATGGGAAACCCAAGATTGAATCCAAATTATGCGGTTCCGCAGTGGATGCCACAGTTTGAATGCAGAAGCGAAACTCAAACCCTGATTGTTCTGGATGATGTTTGGTCACTTTCCGTGTTAGAGCAGCTTGTGTGTAGAATACCTGGTTGCAAATTCGTTGTGGTGTCCAGGTTCAAATTCCCAACAGTTTTAAATGCTATTTATGAAGTTGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTGGCTGAGTGTGAAAGGCTTCCATTGGCTCTTAAAGTGATTGGAGCTTCTTTGAGGGATCAGACTGAGATGTTTTGGGCAAGTGTTAAAAACAGGCTATCTCAAGGCCTAAGTATTGGGGAATCCCATGAAATCAATCTGATTGAAAGAATGGCAATCAGTATCAATTACCTACCAGAAAAGATCAAGGATTGCTTCTTGGACCTGTGTTCATTTCCTGAGGATAAGAAAATTCCTCTAGAAGTCCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAGAAGGAAGCTTATGCAATTGTTGTTGAGCTCTCCAACAAAAATCTTCTCACCTTAGTGAAAGAGGCACGTGCTGGGGGAATGTATAGCAGTTGCTTTGAGATCTCAGTCACTCAACATGATGTGCTGAGAGACCTCGTGCTTAATTTGAGCAACTGTGGGAGCATTAATGCACGCCGGAGATTAGTTATGCCAAAGCGAGAGAATGGACTCCCCAAAGAGTGGTTGAGATACAAGCACCGACCATTTGAGGCTCTGATTGTTTCAATTCACACAGGTGAAATGAAAGAAGTGGACTGGTGTAAACTAGAATTTCCTATGGCTGAAGTGCTGATTATTAGTTTCACATCCAGTCAATACTTCTTGCCTCCCTTCATTGATAGAATGCCAAATTTAAGGGCATTAATAGTAATCAACTACAGTGCATCATATGCTTGCCTTCACAATGTTTCAGTTTTCAAGAATATGGCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACACCCCAGTTATCAGGCATTGTCATGGAAAACTTGGGCAAATTATTTATAGTCCTATGTAAGATCAATAACAGTTTGGAGGGGAAGGAAGCAGACCTGGCTCAAATCTTCCCTAACCTCTCTGAACTCACTCTTGATCACTGTGATGATGTAACTGAGTTGCCCTCAAGCATTTGTGGATTGCAGTCACTCCAGAATTTGAGTCTCACCAACTGCCACAATTTGACTCAACTTCCTCTTGATTTGGGCACACTAAGATCTCTAGAGATCCTCCGCTTATATGCTTGTCCAGTTCTGAAAACACTACCTCCTAGCATCTGTGACTTGATTAGATTGAAGTATATTGACATTTCTCAATGTGTTAACTTGTCATGCTTCCCTGAAGAGATTGGTAAATTAGTAAGCTTGGAGAAGGTTGATATGAGGGAATGTTCCATGATTAGGAATGTTCCAAAGTCTGCAATGTCATTGCCATCTCTGCGGCTTGTAATTTGTGATGAAGAGGTATCGGGTATATGGAAAGATGTTGAGAAGGCCAAACCAAATGTTCATATTCAAGCATCAGAGCAGTACTTTGATCTGGACTGGCTTAAAGAGTGA 2475 0.4436 MALNDFFAGEIATELLKMLINISRKSLLCRTSADQLITYINELLPTIEEIKYSGVELPAPRQSQLNCLSEILRYGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFMQGPMQANILADVHHTRFEMAERFDRVEASNRRLEEYFGAMKIGVGGGGWVEEAVRSMEVDETWVEGSSGNLGVGLDLGKNKVKEMIVGRQDLWVVGISGIGGSGKTTLAREVCRDEQVRCYFKERILFLTVSQSPNVEQLRTKIWGYVMGNPRLNPNYAVPQWMPQFECRSETQTLIVLDDVWSLSVLEQLVCRIPGCKFVVVSRFKFPTVLNAIYEVELLSEEDALSLFCHHAFGQKSIPLAANENLVKQVVAECERLPLALKVIGASLRDQTEMFWASVKNRLSQGLSIGESHEINLIERMAISINYLPEKIKDCFLDLCSFPEDKKIPLEVLINMWVEIHDIDEKEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLVLNLSNCGSINARRRLVMPKRENGLPKEWLRYKHRPFEALIVSIHTGEMKEVDWCKLEFPMAEVLIISFTSSQYFLPPFIDRMPNLRALIVINYSASYACLHNVSVFKNMANLRSLWLEKVSTPQLSGIVMENLGKLFIVLCKINNSLEGKEADLAQIFPNLSELTLDHCDDVTELPSSICGLQSLQNLSLTNCHNLTQLPLDLGTLRSLEILRLYACPVLKTLPPSICDLIRLKYIDISQCVNLSCFPEEIGKLVSLEKVDMRECSMIRNVPKSAMSLPSLRLVICDEEVSGIWKDVEKAKPNVHIQASEQYFDLDWLKE. 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03764 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Seca8g03764 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Seca8g03764 824 Gene3D - 331 414 IPR042197 -
Seca8g03764 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 822 IPR039203 GO:0050832
Seca8g03764 824 Gene3D - 181 325 IPR027417 -
Seca8g03764 824 PRINTS Disease resistance protein signature 367 381 - -
Seca8g03764 824 PRINTS Disease resistance protein signature 280 294 - -
Seca8g03764 824 PRINTS Disease resistance protein signature 684 700 - -
Seca8g03764 824 PRINTS Disease resistance protein signature 205 220 - -
Seca8g03764 824 Pfam NB-ARC domain 191 410 IPR002182 GO:0043531
Seca8g03764 824 Gene3D - 415 503 IPR036388 -
Seca8g03764 824 Gene3D Ribonuclease Inhibitor 543 807 IPR032675 -
Seca8g03764 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 432 IPR027417 -
Seca8g03764 824 SUPERFAMILY L domain-like 567 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03764 Seca-Chr8 107823866 107827409 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03764 8 107823866 107827409 Seca8g03764 8 107823866 107827409 ECH