Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03702 ATGGAAGTTTCAAGTCTTCAAAAGTTGGTGAAAACAGCACCATCAAAAGCTTTGGTTATCAGAATCAATTTGTTCTGTCTTTCCATCTTTCTGGTTATCTATACAACTCTTCTTCTCCGTCCATCTTCTTCAGTCTATTTTGAAAATGCAGCCTCCCTTGTTAGGTGCTCATTGAGTGAATGCCATCACAAGGCGGAAAAAAGCATCAAAATGAAAGCTGTATTGGAGGAATTACCTCAACCAAAATCAATGATGCCAAAGAAGAATGCAACTAAAATAGAGGTGCCTAGCTTCTTTGGTGAAATGGGAACAGGGCTGAAGATAGGAATGGTGAACATGCAGGAAGATGATGTGAGTGAATGGAGCTCACATGGAGAAACAATACCTGTTTATTTTGAGAGGGTATCAGAGTTTTTCAATTGGACAGATTTATTTCCTGAATGGATAGATGAAGAAGAAGAGAGTGATGTTCCATCATGTCCTGAGATACCTATGCCAGAGTTTGCAACATATGAAAGCATGGATGTGATAGTGGCCAAGTTGCCATGCAATTACCCTGAAGAAGGGTGGGGGAGGGATGTTTTCAGGTTACAAGTTCATCTTATTGTGGCAAATATGGCTGTGAAAAAAGGGAAGAAGGATTGGAAATGGAAAACCAAAGTGGTTTTCTGGAGCAAGTGTAGACCAATGTTGGAGCTTTTTAGATGCAATGACTTGGTTAAGCAGGAAGGTGATTGGTGGTTCTTTGAGCCAGATGTAAAGAGGTTGGAGCAGAAGGTTTCATTACCTGTTGGGTCCTGCACTTTGGCTTTGCCTCTCTGGGAACAAGGGATCGATAAGGTGTATGACATGTCCAAGGTGGAACGAAGCGTGAGAAGCGGAGCTAGAGTGAAACGCGAGGCGTACGCGACGGTGCTCCACTCCTCAGAAAGCTACGTTTGTGGCGCAATAACACTGGCACAGAGCCTCCTGAAAACAGGAACCAAACGCGACCTTATCATCCTTCTAGACAATTCCATCTCCACACGCAAACGGCGTGCGCTAGCATCTGCCGGGTGGAAGATCCGAACCATAACCCGGATCCGTAACCCGAAAGCAGAAAACGGAACCTACAATGAGTACAATTACAGCAAGTTCCGCCTATGGCAACTCACTGATTACGACAAAGTAATTTTCATCGACTCCGACATCATCGTCCTTCGCAACCTGGACATCCTCTTTCACTTCCCACAAATGTCGGCAACAGGCAACGATCAATCCATATTCAACTCTGGGATCATGGTCATTGAGCCTTCCAACTGCACGTTCAACGTCCTCATGAGCCGTCGATACGACGTCGTTTCATACAACGGCGGTGACCAAGGGTTTCTGAACGAGATCTTCGTGTGGTGGCACAGGCTACCTAGAAGGATGAACTTTTTGAAGAATTTCTGGGCGAACACAACGTTGGAGGCTAGTGTGAAGAACGGGTTGTTCGGTGCGGACCCTCCTAAGCTTTACGCCATTCACTTCCTTGGGTTGAAGCCTTGGCATTGCTACAGGGACTATGATTGCAACTGGGATGTGGGGGATCAAAGGGTTTATGCCAGTGACGTGGCGCATCGACGGTGGTGGAAGCTCCATGATGGAATGAATAAGAAGTTGCAGAGTTTTTGTAGGTTGACGAGGCAGCGTAGGACTGAGTTGAATTGGGAGAGGAGGAGAGCTAGCAAGTTGGGGTTACCCGATGAGCATTGGAAGATGAATATTACGGATCCTAGAAGATCCGGTTCTCTTTTGATGGATTAG 1788 0.4586 MEVSSLQKLVKTAPSKALVIRINLFCLSIFLVIYTTLLLRPSSSVYFENAASLVRCSLSECHHKAEKSIKMKAVLEELPQPKSMMPKKNATKIEVPSFFGEMGTGLKIGMVNMQEDDVSEWSSHGETIPVYFERVSEFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFATYESMDVIVAKLPCNYPEEGWGRDVFRLQVHLIVANMAVKKGKKDWKWKTKVVFWSKCRPMLELFRCNDLVKQEGDWWFFEPDVKRLEQKVSLPVGSCTLALPLWEQGIDKVYDMSKVERSVRSGARVKREAYATVLHSSESYVCGAITLAQSLLKTGTKRDLIILLDNSISTRKRRALASAGWKIRTITRIRNPKAENGTYNEYNYSKFRLWQLTDYDKVIFIDSDIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMSRRYDVVSYNGGDQGFLNEIFVWWHRLPRRMNFLKNFWANTTLEASVKNGLFGADPPKLYAIHFLGLKPWHCYRDYDCNWDVGDQRVYASDVAHRRWWKLHDGMNKKLQSFCRLTRQRRTELNWERRRASKLGLPDEHWKMNITDPRRSGSLLMD. 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03702 595 CDD GT8_Glycogenin 300 544 - -
Seca8g03702 595 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 549 IPR029044 -
Seca8g03702 595 FunFam Hexosyltransferase 297 548 - -
Seca8g03702 595 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 298 548 IPR029044 -
Seca8g03702 595 PANTHER GLYCOGENIN SUBFAMILY MEMBER 190 589 - -
Seca8g03702 595 Pfam Glycosyl transferase family 8 305 408 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03702 Seca-Chr8 106662784 106666197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03702 71 594 Glycosyltransferase AT4G33330 68.113 0.0 769
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03702 8 106662784 106666197 Seca8g03702 8 106662784 106666197 ECH