LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g03684	ATGGTCATCGCCGACTCCGACTACGAAGGCCCTGCTATCCAAGCCCTCGGCTCTCTCTTCAAGGTCACCCAAGTCTTCCTCTGGGACGATGGCCTGCAGGTTCCATCATCAACTGAACGCTCCAAATTGGCTGAAGCTGAAGACAATCACGCCTCAGACCCCGTTCCAGATTGGAGTGACCTTGTTCCACCCGAGGATTTGGAACTTACCAGACAGATGAATGAATTGGGGCTCCCTCTTTCTTTTCAGACAAGCAAGGAGAAATTTGGTCCAGTAAAAGGCAAGAAAAAGGGTGCACGTTCGAAGCATCGACGTACTTGTCATAATCCTGTAGATGAAACTCTATATGAAGTGAGTGTGGAGGAGGTTGTATCTCCTGCTGAATTTCATGATAAAACAAACAGTAATTTATCTTGTATATCAATGCTGGGCCAAAGTGAATCATCTTACTGTGATGGTGCAGTGGAAGTTGATATGACCCAATGTGGTGAAGGAGATAATTCAGCATGCTGTACTGGGTTTGCTAATGGTGTTTCCTGGGAGAAAAATAATGATGATATAAATGATGCATCAACTAATGATGCTCTGAATGGTGACGTTCTAATCAGAAATGTTTGTGTTGATTTGAAAACTGCTCCTGCTTCAGATACTGGAGTCCATTTGACAGGTGCTGGTGTCAATGATTGTGGGATAGAATATGGTGAAAGCTTGATTGACAATGAATGTTTAGAATTTTCACCTATTGTTTGCAAAGATACAGATTGTGAGACTATTTGCAATGATGATGGTGCTACCATTTGGCAGCCACTGGCTAATGAATCAGAATCACTTCCCATGAGTTTGGAAGGGATTGAATGTGACAGCATTGATGTGTCAATTAATTGTGGTGATCTTGGAGATTGGATGGTGTTCTGGGATACTTTCTATATGAGAAGGTACTTCTATAATATCAAAACACACACTTCTACATGGGACCCACCCCCAGGGATGGAGCATCCAGCAATTGGTGGGTGTACTGAATTAGATGATAGTGAAGCTCTGAAGTCAGCAGAGGAGCGTGGAACACAAAACAGTAAACCACCTGAAGAAACCTTGATTGAAGAGAACTTATCTGGAAAGCAACTCGGAGAGTATTCGGCTGAGATTGGAGTTGCTGCTGGCAAGTTGGTCTCTGATATAACTACAAATAGTGAAGACCAACCTCTTGATCATTCAGATGAGAATCTTGAGAGAAGTAGCTGCAATGATAGAGTTTCATGTTGCTCAGTATCAAATACCCTGGATCATATCATTAGCTCTAGTGGAAGATGCAATCAAGCAGTGTCAGAGGTTGATCATACACCCATGGAAAACATGGCAATTGATATGTCTGGATTGGATACTAAATCTGATCCTTTCATGTCAAAACAGGAAAATAAAGTGAAAAGAAGACAAAGGCAGAAGAAATTCTATAATGAATCTGAAGATCTCCACTTGCAAAAAATGCCTGAAGCCTATTCTGCTGCAATTGGCAAATATTGGTGTCAGAGGTATATTTTATTCTCTAGATTTGATGGTGGTGTCAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGGCTATTGCTCAGCATCAGGCAATACGCTGTGCTTGTGGCACGATAATTGACTGTTTCACTGGCGTTGGGGGGAATGCTATCCAATTTGCACAACGGTATAATGTTGTAATTTTGGTCAAATACTTATGTCTTCCTCTGAGAGAGAGCACACATGTAATTGCAATTGATATTGATCCATTGAAGATTGATTATGCTAAGCATAATGCTGCTATTTATGGGGTGGATGATCAAATTGACTTTGTAATGGGTGACTTCTTCCTCTTGGCACCAAAGTTAAAGGCTGATACTGTTTTCTTATCTCCACCTTGGGGGGGACCTGATTATGCCAAAGTTATGACTTATGATATGAAGACAATGCTTAGACCACATGATGGATGTACTCTGTTCAATGTTGCAAAGGAGATTGCTTCCAGAGTTGTCATGTTCCTTCCAAGAAATATCAATTTCAATCAATTGGCAGAGTTATCTCTATCTGTCTGTCCACCATGGTCGTTAGAGGTGGAGAAAGTGCATTTAAATGGAAAATTGAAGGCGATCACTGCTTATTTCAGTGATACATCAGTTGGAGGGTGCTGA	2178	0.4146	MVIADSDYEGPAIQALGSLFKVTQVFLWDDGLQVPSSTERSKLAEAEDNHASDPVPDWSDLVPPEDLELTRQMNELGLPLSFQTSKEKFGPVKGKKKGARSKHRRTCHNPVDETLYEVSVEEVVSPAEFHDKTNSNLSCISMLGQSESSYCDGAVEVDMTQCGEGDNSACCTGFANGVSWEKNNDDINDASTNDALNGDVLIRNVCVDLKTAPASDTGVHLTGAGVNDCGIEYGESLIDNECLEFSPIVCKDTDCETICNDDGATIWQPLANESESLPMSLEGIECDSIDVSINCGDLGDWMVFWDTFYMRRYFYNIKTHTSTWDPPPGMEHPAIGGCTELDDSEALKSAEERGTQNSKPPEETLIEENLSGKQLGEYSAEIGVAAGKLVSDITTNSEDQPLDHSDENLERSSCNDRVSCCSVSNTLDHIISSSGRCNQAVSEVDHTPMENMAIDMSGLDTKSDPFMSKQENKVKRRQRQKKFYNESEDLHLQKMPEAYSAAIGKYWCQRYILFSRFDGGVKMDEEGWFSVTPEAIAQHQAIRCACGTIIDCFTGVGGNAIQFAQRYNVVILVKYLCLPLRESTHVIAIDIDPLKIDYAKHNAAIYGVDDQIDFVMGDFFLLAPKLKADTVFLSPPWGGPDYAKVMTYDMKTMLRPHDGCTLFNVAKEIASRVVMFLPRNINFNQLAELSLSVCPPWSLEVEKVHLNGKLKAITAYFSDTSVGGC.	726

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g03684	725	Pfam	RNA cap guanine-N2 methyltransferase	547	718	IPR019012	GO:0001510\|GO:0008168\|GO:0009452
	Seca8g03684	725	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	519	674	IPR029063	-
	Seca8g03684	725	ProSiteProfiles	WW/rsp5/WWP domain profile.	301	329	IPR001202	GO:0005515
	Seca8g03684	725	ProSitePatterns	WW/rsp5/WWP domain signature.	301	327	IPR001202	GO:0005515
	Seca8g03684	725	MobiDBLite	consensus disorder prediction	38	60	-	-
	Seca8g03684	725	CDD	AdoMet_MTases	548	645	-	-
	Seca8g03684	725	FunFam	Trimethylguanosine synthase 1	494	723	-	-
	Seca8g03684	725	PANTHER	S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED	64	720	-	-
	Seca8g03684	725	Gene3D	-	292	356	-	-
	Seca8g03684	725	Gene3D	Vaccinia Virus protein VP39	497	722	IPR029063	-
	Seca8g03684	725	CDD	WW	299	329	IPR001202	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g03684	Seca-Chr8	106167092	106175342	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca8g03684	8	106167092	106175342	Seca8g03684	8	106167092	106175342	ECH