Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03682 ATGCTATCTATGATGGCTTGCAAATTTTCATATGAGAATGAACAATTCAATAATAGCGCAGTAAGAGAGCACTGGGATATGGATTTCTTGGGGCTGTACAACTTCTGGAACGATTACCAAGAACTGTGGTCCACAAAAGCTATCATAGTGCAAGATACCAAGTCTGAACCCAACTTGATTGTGGTTGCATTTAGGGGTACAGAGCCATTTGAAGCGGACCAATGGAGAACAGATGTGGATATCTCGTGGTATGAGTTGCCCAATGTGGGTAGGATACATGGTGGGTTCATGAAAGCTTTGGGCCTTCAGAAGAACAATGGATGGCCCAAAGAGATTGACCAAACCGGCCAACATAGTTATGCTTACTACACAATCAGAGAGAAGCTGAGAGCAATGTTGGAGGCTAATGAGGATGCAAAATTCATATTGACAGGACACAGCTTGGGAGGAGCCTTGGCCATTCTGTTTGCTGCGGTGCTCACATTGCATGAGGAAGCATGGCTGTTGGACAAGTTAGAAGGGGTTTATACATTTGGGCAGCCAAGAGTAGGAGATCATCAGTTTGGGGAGTTCATGAAGGACAAGTTGAGAAAGTATGATGTAAGGTATAGGAGGTATGTTTACAGCAATGACATGGTGCCTAGGGTCCCTTATGATGACAAAACCCTCTTCTTTAAGCACTTTGGTCCTTGCCTCTACTTTAACAGCTTGTACCGGGGGCAGGTTCTAGAGGAGGAGCCAAACAAGAATTATTTCTCTTTGTTCTGGGTCATACCCAAGATCTTAAACGCGGTTTGGGAGCTTAGTAGAGGTTTCCTTCTCCCCTTCGTTAGAGGTAGAGACTATAGACAGGATTGGTTCATGGCTATATTCAGGCTCCTTGGATTGATAATTCCAGGAATACCAGCTCATCTTCCTCCAGATTACGTCAATGTTACCCGATTGGGATCCTTAGACGAACCTCGAGAGCCTCAGAGTCTTCAAGATTCCAAAGCTGACTAA 1002 0.4461 MLSMMACKFSYENEQFNNSAVREHWDMDFLGLYNFWNDYQELWSTKAIIVQDTKSEPNLIVVAFRGTEPFEADQWRTDVDISWYELPNVGRIHGGFMKALGLQKNNGWPKEIDQTGQHSYAYYTIREKLRAMLEANEDAKFILTGHSLGGALAILFAAVLTLHEEAWLLDKLEGVYTFGQPRVGDHQFGEFMKDKLRKYDVRYRRYVYSNDMVPRVPYDDKTLFFKHFGPCLYFNSLYRGQVLEEEPNKNYFSLFWVIPKILNAVWELSRGFLLPFVRGRDYRQDWFMAIFRLLGLIIPGIPAHLPPDYVNVTRLGSLDEPREPQSLQDSKAD. 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03682 333 Pfam Lipase (class 3) 61 220 IPR002921 GO:0006629
Seca8g03682 333 CDD Lipase_3 1 235 - -
Seca8g03682 333 Gene3D alpha/beta hydrolase 4 257 IPR029058 -
Seca8g03682 333 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 319 IPR044819 GO:0004806|GO:0006629
Seca8g03682 333 SUPERFAMILY alpha/beta-Hydrolases 6 252 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03682 Seca-Chr8 106151651 106156290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03682 1 326 Acyl Lipid Metabolism Gene Families AT1G56630 59.292 2.66e-145 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03682 8 106151651 106156290 Seca8g03682 8 106151651 106156290 ECH