Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03648 ATGAGTACCATCCTCGGAAAATTGTTGGTCTCAACTTTGTACATCCTCTTCCTGTCCCTTCCTCTCCACACGTCAGCACATGACATTAAAACAGATACACTAAATTTCATCAATGCCCGCAGTGGCCACAAGAACAAAGGTGGTGGAGATGGTAGCTCAAGCAAAGGCTGCAACAACAACAACCAATTGAACAAAATACCATGTAAAAAATCAAACCCCATTCAAGCAGCTGCAGCTCCATCTTTACCTGTCAAAACAGATTCCCTGGTTTTTACTGATCAAAGACTTGAAGTAGTTTACCCAGTGATTCAAAATTTCAAGTCTATCATCACTTCAGATCCCTTAGGTGTTACCAAATCTTGGGTAGGTTCTGATATATGCAGTTATAAAGGATTCTACTGTGATAATCCTCCAGATAACAGCTCTGCTATTGCTCTGGCTTCTGTTGACTTCAATGGTTTCCAACTTGCTGCTTCTACTCTTGATGGCTTTATTGATAAGCTTCCTGATATTGCTCTTTTCCATGCAAATTCCAACAATTTTTCTGGCACAATCTCACCCCAAATTGCCAAGCTACCTTATCTCTATGAGCTTGATGTAAGCAACAATCAATTGTCTGGTCCATTTCCCATGGCTGTTCTAGGCATGGACACATTAACTTTCTTGGATATTAGGTTCAATTTCTTCTCTGGGGCAGTCCCACCTCAGATATTCATCCAGAACCTTGAAGCCCTCTTTATCAATGACAATATCTTCACTCAGGGTTTACCTGATAATTTAGGCAACACTCATATTCTCTTACTCACCTTAGCAAACAACAAATTCAATGGTCCAATACCTAGAAGCCTTCCAAAAGCTTTGTCCACTCTCACTGAGGTTCTGTTACTCAACAACCAGCTAACAGGTTGCTTGCCTTATGAGATTGGGTATCTTCAAGAGGCTACAGTGTTTGATGCTGGAAACAACCAGCTGACAGGTCCTTTACCATTCTCTTTGAGTTGTCTTGAGAAGGTGGAGCTGCTCAATTTGGCTGGTAACTTGCTGTATGGTATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTTACTCATGTGGGACCATTGTGTAGGATCTTAATTCAGAGAGGAGTTCTTGATGTTAGAAACAACTGTATCCCTGATCTTCCATTCCAGAGATCAGTGTTTGAGTGTGCAACTTTCTTTTCACACCCAAGGATGTGTCCCTTCATGTGGGCTCATAGTTTCATCCCTTGTAAGCTTCCTTTTCAAAACACCCCAGTTTCTTCGATTCCTTAG 1329 0.4138 MSTILGKLLVSTLYILFLSLPLHTSAHDIKTDTLNFINARSGHKNKGGGDGSSSKGCNNNNQLNKIPCKKSNPIQAAAAPSLPVKTDSLVFTDQRLEVVYPVIQNFKSIITSDPLGVTKSWVGSDICSYKGFYCDNPPDNSSAIALASVDFNGFQLAASTLDGFIDKLPDIALFHANSNNFSGTISPQIAKLPYLYELDVSNNQLSGPFPMAVLGMDTLTFLDIRFNFFSGAVPPQIFIQNLEALFINDNIFTQGLPDNLGNTHILLLTLANNKFNGPIPRSLPKALSTLTEVLLLNNQLTGCLPYEIGYLQEATVFDAGNNQLTGPLPFSLSCLEKVELLNLAGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPLCRILIQRGVLDVRNNCIPDLPFQRSVFECATFFSHPRMCPFMWAHSFIPCKLPFQNTPVSSIP. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03648 442 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 430 - -
Seca8g03648 442 Gene3D Ribonuclease Inhibitor 101 405 IPR032675 -
Seca8g03648 442 SUPERFAMILY L domain-like 102 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03648 Seca-Chr8 105134973 105136301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03648 88 415 Leucine-rich Repeat extension Gene Families AT3G24480 43.598 1.37e-85 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03648 8 105134973 105136301 Seca8g03648 8 105134973 105136301 ECH