Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03643 ATGGAATATCTAGGGATTGATGTGCAGTGTGCGGTGGGATCTCTTCGCAATGGCCACTTCCCTGACAAGGACTGCTTGCTCCCTCTCATTTCCAAACTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGATTTTAAAAATTCTGAAGCATCAAAGCGTCAGAGGCCTTAGCATGTTATCCTTCGAGCTTGAAGTTGTTGGATATACCATAGCACTGGCTTACTGTCTTCACAAAGGCCTTCCTTTTTCAGCTTATGGAGAATTATTGTTTCTTTTGATCCAAGCTTTGGTATTGGTTGCCATAATCTACTACTATTCTCGACCTTTGCGTACAACTACATGGATCCGGGCATTGCTGTATTGTGCCGTAGCACCCACTATCTTAGCTGGCCAAATTGATCCTTTCCTCTTTGAGGCTCTGTATGCATCCCAGCATGCAATCTTTCTCTTTGCAAGGATCCCACAAATATGGCAAAACTTTTCTAACAGAAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAATTTTGGAGGTTCAATGGTTAGAGTATTCACCAGCATCCAAGAAGATGCACCAAAAAGTGGTATCCTTGATTCTTAA 621 0.4412 MEYLGIDVQCAVGSLRNGHFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVRGLSMLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALVLVAIIYYYSRPLRTTTWIRALLYCAVAPTILAGQIDPFLFEALYASQHAIFLFARIPQIWQNFSNRSTGELSFLTSFMNFGGSMVRVFTSIQEDAPKSGILDS. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03643 206 Gene3D - 150 201 - -
Seca8g03643 206 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 6 203 IPR016817 -
Seca8g03643 206 PIRSF Mpdu1 6 205 IPR016817 -
Seca8g03643 206 SMART ctns 44 75 IPR006603 -
Seca8g03643 206 SMART ctns 156 187 IPR006603 -
Seca8g03643 206 Gene3D - 29 112 - -
Seca8g03643 206 Pfam PQ loop repeat 151 200 IPR006603 -
Seca8g03643 206 Pfam PQ loop repeat 30 89 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03643 Seca-Chr8 104978244 104985116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03643 1 201 Miscellaneous Gene Families AT4G07390 80.100 2.17e-122 344
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03643 8 104978244 104985116 Seca8g03643 8 104978244 104985116 ECH