Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03556 ATGGCGATGAATCTGAACGACTCAAATTTCTCTTACAACGAGGAAGAGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTTCTTTCAGCGATTTCCCCGAAGACGTTCAGCTCTGCATCCTCTCCTTCCTTGGCCCCTCCGAGATCGCCACGTTCGCCTGCACATCGAAGCGCTTTGGTTCACTCTGCGCCAACGACGCCAAGCTCTGGTTCACCCTCTGTGACCGCAGATGGGGCTCCAAGACACACATCAACAAATGGGGCTCCAAGACACACATCAACAAATGGGGCAAAGGGAAAATCCCTTACAGGCTCCTCTACAATACCCTCCACGAATGGGACAATCTCATTGGTTTCTGGCGTCGAAGCGGAACAGGAAACGCCGCAATTTCCTCCCCCTCTTTGCTTTTCTTCGAGTGGGGCCCATCATTCCTTGCTGCTTCTAGGGTTTCCCCTTCCCAATTTGGTACCTATGAAGTCGTCAAGGTGCCGTTTTTACGGATGAGTCTCTCCGAAGAGGGACAGGTCGTGAATCTTCTGGACCCTGATGGTAGAACTGATTTCAATGAGAATGAATTGATTCAGGTCAATGTTAGTTTCATGGGGAAAACCCACTTCGTTGTGGAGGAGAACCAGTTCAGGAGAAGCTCCAGCTATGCGAATCTCAGTGGTGAAGATTGTGGATTTGGAGAGGATGGGATCGGTGCTGAGAGTGGATCGCCGCCGGGGAGCTTGCCGGACAGGTTGATGACGGAAATTTATCAGCGTTTCGCGAACCGGACTAGTCCTGGCAGCGAGAGATCGAGGAGACAAAGGAGGAGGGAAAAGGAAAGGTTGGCTAGAAGGAAATGGGAGCCTGAGCATTTTGTGAAGATTGTGAATTGCTCACCCTCGCCATCAAGGCCTTTACAAGGCCTGTGGAAGGGAATTTGTGATGACATGAGTTTAGCCTTTTACCTTGTGGCATATGATGACATTGGCGGCATTGCTTGCCGAAGACTTGGGGATCCTCCAGAACGTTTCTCCAGTTATGCCCCGGTTTTCTGGACGTCTAATGCTACATTTCTGGAATCTCCCTTTTGTCTAGAGGAAGAATCTTTGTATGACAGTCGCATTCATCTTCAACCACTTGAACAACACAATGAAATTCAGGAGCAGTTCCATTTGTCAGATGACGAAGGGGTAAATCGAATTCAGCAATTCCAGTTGCCAGACAATGAAGTGGTAAATCGAATTCTTCACATAAGTTCAAGTTATGATTTAGTTATTCCGGACCTTGCTGGAACAATAAATCCAAGGAGTGCAGAGGGAAGGATTTGGCAGTACCAGGATGGTACTTTTGGATTTGGATTCCTTCGGGACAATTTTGTCATAGACATGAAACATATTGTCCGTGATGGTTGTCTTATGGATACAACAAATGCTTCTGCTGATTAA 1440 0.475 MAMNLNDSNFSYNEEEASSSSSSSSSSLSFSDFPEDVQLCILSFLGPSEIATFACTSKRFGSLCANDAKLWFTLCDRRWGSKTHINKWGSKTHINKWGKGKIPYRLLYNTLHEWDNLIGFWRRSGTGNAAISSPSLLFFEWGPSFLAASRVSPSQFGTYEVVKVPFLRMSLSEEGQVVNLLDPDGRTDFNENELIQVNVSFMGKTHFVVEENQFRRSSSYANLSGEDCGFGEDGIGAESGSPPGSLPDRLMTEIYQRFANRTSPGSERSRRQRRREKERLARRKWEPEHFVKIVNCSPSPSRPLQGLWKGICDDMSLAFYLVAYDDIGGIACRRLGDPPERFSSYAPVFWTSNATFLESPFCLEEESLYDSRIHLQPLEQHNEIQEQFHLSDDEGVNRIQQFQLPDNEVVNRILHISSSYDLVIPDLAGTINPRSAEGRIWQYQDGTFGFGFLRDNFVIDMKHIVRDGCLMDTTNASAD. 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03556 479 MobiDBLite consensus disorder prediction 264 280 - -
Seca8g03556 479 ProSiteProfiles F-box domain profile. 27 74 IPR001810 GO:0005515
Seca8g03556 479 PANTHER F-BOX ONLY PROTEIN 48-RELATED 15 296 IPR045118 GO:0019005|GO:0031146
Seca8g03556 479 SUPERFAMILY F-box domain 16 112 IPR036047 GO:0005515
Seca8g03556 479 SMART fbox_2 33 74 IPR001810 GO:0005515
Seca8g03556 479 MobiDBLite consensus disorder prediction 1 25 - -
Seca8g03556 479 Gene3D - 16 115 - -
Seca8g03556 479 CDD F-box_SF 32 64 - -
Seca8g03556 479 MobiDBLite consensus disorder prediction 261 280 - -
Seca8g03556 479 Pfam F-box domain 30 67 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03556 Seca-Chr8 102438682 102440642 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03556 8 102438682 102440642 Seca8g03556 8 102438682 102440642 ECH