Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03554 ATGGCATTGGTGGTGGCTCCCGAAGATGCAGCAGCACTTGTCAACCTTGAGTCAGCATATTCTGATGTGGAAGCTCTCCTTCGAGCTTCAGAGGAAATGGAAGATAACCTTGAAACGATGGAAACAAGGTTTAATCTTAAACAAGGATCACTATCAACAGCATCAAGAAGAATCGCCCCTTTGCAGTCCTTGGCCATGTCAAGGAAAGCACTTGATACCAGAATCAACAGAGCCATTTCCCCTGCTCTTGCACTCCTAGACATTTTCAAGCTCACAGAGTCTCTCCAGAACAACCTCACTGATCTCTCATCGAAACTATCAGCAGAGAAGTCACATAAAAAACGGCTCCAGAAGCTCCTTGATTACATGGATTGTGTGAATCAGCTAAATGAGGCTATTAACTCCATATGCCAGGAGGTTGAGCCAGTGATTCAGAAGCTTCAGGAGGTGGTGGAGTTTATAAGCAGAACAAAGGCAGCTGATCAGTACAGAACACAAAGGTTAAGAGAGGCACTTGTCACTCTCAAGGCACTTTATGAAACCGAGGTGGATGACATGAGGTTCGAGGGTATGCTGGATCAGGCGTTGCTTCATATGCAGGATGAGTTTGAGGCTCTCTTACTGAAAATGAAGCATAGGAACCTAGGAGTTATGTCACACAAACATGCTGGTGGTAATGACACTGATCATGTCAAGGTTTGCCCTGAATTGGGATCAGAGCTGGAAATTGAAGTCATGAGACGAATTTCAACCATTCTTGCTGCCAATGATTGCCTAGATATATGCATTGACATCTATGTTAAGGTGAGATATAGAAGGGCTGCCAAAGCATTAATGAAGCTAAGTCCTGATTACCTGAGAACATATACCCCAGAAGGAATTGATGAAATGGAATGGGAAAACTTAGAGACAGCGATAACCCTTTGGATCCAACACCTAGAAGTTGCGGCAAAGAAGGTTCTCTTATCAGAAAAGAGACTCTGCGAAAGAGTTTTGGGTGAAATCATGGATGGACTAGTCTGGCCAGAATGCTTTGTGAAAATATCAGACAAGATCATGGCTGTGTTCTTTCGGTTTGGAGAAGGTGTTGCCAGAAGCAGAAAAGAGCCTCAGAAGCTGTTCAAACTGTTGGACATGTTTGAATCCTTGGAGAAACTCAAACCCCATATAATGGAAATCTTTGATGGTGAAGCTGGAGTGGATATCTGCACACGGTTTAGAGAGCTTGAAAAGCTCATCATCGATGCTTCAAGCAAAGTTTTCTGGGAATTCGGCCTACAAATTGAAGGGAATGCTGATGGTCTTCCACCCCCACAAGATGGTTCTGTTCCAAAACTTGTAAGATATGCTATTAACTACCTCAAATACCTTGCCACGGTGAATTACAGAACAACCATGGCTAAGGTTCTCCGAACAGAACAGATATGGAAAGGTGGGGTGTTATCCAAACCCGAGACAGATGAGAGTTTATTGAAGCATGCTATTTCAAATATCATGGAGGCTCTTCAAAGAAACATCGACTCTAAACGTTCTAGTTGCAGGGACAGAATTTTGATCCATATATTCATGATGAACACGTACTGGTACATGTATATGAGAACCAAGAACACAGAGCTTGGTGAGTTGTTAGGTGAGCAATACATGAAAGATGGTTACAAGGCAGTGGCAGAAGAATCTGCTTACATGTACCAAAAGCAAGCGTGGGGTGTTTTGGTGAGGATTTTGGATGCAGAGGATCTGAGGGAACAAGGGAAAGAAAGCATTGGAAGGCTAGTGACAGAGAAGATTGAGACTTTCTTCAAGTGCTTAGATGAGATTTGTGAGAGGCATAGAGTGTGTTATAGTATACCAGATGTGGATTTGAGGGAACAAATGAGAGAAGCTACAATGAAGCTTGTGGTGCCGGCTTATGCAGAGTTCTTGGAGTCTTATTCAGGATTGTTGCAGAGGAAAGTGTATCCGAGTCCTGAAAGGTTACAAGGGTTGTTGAGGAAGGCTTTTGATGGTGATGCTGATGTGAGGTTGAAACGGCGAAGCTCTACTTCTAATGATTGGAATGGTGGACGTAACTCTGCCTCCATGGAAGGTGATAACAGGCAGTCCAGATGA 2109 0.4348 MALVVAPEDAAALVNLESAYSDVEALLRASEEMEDNLETMETRFNLKQGSLSTASRRIAPLQSLAMSRKALDTRINRAISPALALLDIFKLTESLQNNLTDLSSKLSAEKSHKKRLQKLLDYMDCVNQLNEAINSICQEVEPVIQKLQEVVEFISRTKAADQYRTQRLREALVTLKALYETEVDDMRFEGMLDQALLHMQDEFEALLLKMKHRNLGVMSHKHAGGNDTDHVKVCPELGSELEIEVMRRISTILAANDCLDICIDIYVKVRYRRAAKALMKLSPDYLRTYTPEGIDEMEWENLETAITLWIQHLEVAAKKVLLSEKRLCERVLGEIMDGLVWPECFVKISDKIMAVFFRFGEGVARSRKEPQKLFKLLDMFESLEKLKPHIMEIFDGEAGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGLPPPQDGSVPKLVRYAINYLKYLATVNYRTTMAKVLRTEQIWKGGVLSKPETDESLLKHAISNIMEALQRNIDSKRSSCRDRILIHIFMMNTYWYMYMRTKNTELGELLGEQYMKDGYKAVAEESAYMYQKQAWGVLVRILDAEDLREQGKESIGRLVTEKIETFFKCLDEICERHRVCYSIPDVDLREQMREATMKLVVPAYAEFLESYSGLLQRKVYPSPERLQGLLRKAFDGDADVRLKRRSSTSNDWNGGRNSASMEGDNRQSR. 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03554 702 MobiDBLite consensus disorder prediction 680 702 - -
Seca8g03554 702 Coils Coil 13 43 - -
Seca8g03554 702 PANTHER EXOCYST COMPLEX PROTEIN EXO70 116 668 IPR004140 GO:0000145|GO:0006887
Seca8g03554 702 MobiDBLite consensus disorder prediction 678 702 - -
Seca8g03554 702 SUPERFAMILY Cullin repeat-like 119 668 IPR016159 -
Seca8g03554 702 Gene3D Exocyst complex component Exo70 143 677 - -
Seca8g03554 702 Pfam Exo70 exocyst complex subunit 309 663 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03554 Seca-Chr8 102393560 102396559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03554 43 655 EXO70 exocyst subunit family AT4G31540 30.269 3.66e-79 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03554 8 102393560 102396559 Seca8g03554 8 102393560 102396559 ECH