Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01209 ATGGAAAAGTCAACGGCATGTTTGGTTGGTGCCATTGTGATCCTGTGTTGTTGTTGCATAACCCATGTCACATCTGATGCATCAGATCATCGTTACAGAGAAGGAGATTCCGTCCCATTTTATGCCAATAAGGTGGGACCCTTTCACAATCCCAGTGAGACATACCGATATTATGATCTTCCATTTTGTTCACCAGCTAATGTGGAAGAGAAGAAGGAAGATCTTGGTGAAGTTTTGAATGGGGATAGATTAGTTGATGCTCCTTTCAAACTGGACTTCCTAATTGATAGAGAACCTGAGAGTATCTGCAGAAGGAGGCTCACAAGAAAAGAGGTTGCACAATTCAGAAAAGCTGTCTTGAAGGACTATTTTTTTCAAATGTACTATGATGATTTACCCATTTGGGGTTTTCTTGGAAAATTTGACAGTGAAGACAAAGATGACACAACTGCTAGGGCCACAGTTTATCTTTTTAAGCATATCCATTTTGAGATCCTATACAATAAGGATCGTATCATTGATGTTTTCATTCGAAATGATCCAAATGCAGTTGTGGACTTGACAGAAGATAGAGAGGTTAATGTGGACTTCACATATTCTGTCAAATGGACTAAAACAGATATTCCATTTGAGAAGAGGCTAGAAAAATACTCACAAACATCCTCACTCCATCACTTGGAAATCCATTGGTTTTCTATTATTAACTCCTGTGTGACTGTTCTCCTCTTGACTGGATTCCTTGCCATGATTCTCATGCGTGTACTTAAGAATGATTTTGTTAAGTTTACTCCTGATGAGGAGGCAGTTGATGATCAAGAGGAGAGTGGATGGAAGTATATCCATGGTGATGTGTTCAGGTATCCAAGATACAAGTCTTTGTTTGCAGCAGCTCTTGGAACAGGCACCCAGCTATTTACACTTGCAATCTTCATCTTTATGCTTGCTCTAGTTGGTGTTTTCTATCCATACAACAGGGGAGCTTTGTTTACTGCACTGGTTGTCATATATGCACTAACATCTGGCGTTGCGGGTTACTCTGCAGCTTCCTTCTATTACACAATTGAAGGGAAAAATTGGGTGAAAATTCTGGTGTTGACTGGAAGTCTATTCTCTGGACCTTTGTTTTTGACATTCTGCTTTCTTAATACTGTTGCACTTGCCTATAACTCCACTGCAGCACTGCCATTTGGAACAATTGTGGTTATTTTCCTCATATGGACTCTAGTAACCTCACCTTTACTAGTATTGGGTGGGATTGCTGGTAAGAATAGCCAATCAGAGTTTCAAGCTCCATGTCGCACCAACAAGTATCCTAGGGAGATTCCCCAATTACCTTGGTACCGTAGAACTCTTCCTCAAATGGCTATGGCAGGATTTTTGCCATTCAGTGCTATTTACATTGAACTCTACTACATATTTGCTAGTGTGTGGGGTCACCAGATTTACACCATATACAGCATTTTGTTCATTGTTTTCATCATCCTCTTGATTGTCACTGCTTTTGTCACTGTGGCATTGACTTACTTTCAGCTTGCTACTGAGGACCATGACTGGTGGTGGAGGTATGTATAA 1572 0.4033 MEKSTACLVGAIVILCCCCITHVTSDASDHRYREGDSVPFYANKVGPFHNPSETYRYYDLPFCSPANVEEKKEDLGEVLNGDRLVDAPFKLDFLIDREPESICRRRLTRKEVAQFRKAVLKDYFFQMYYDDLPIWGFLGKFDSEDKDDTTARATVYLFKHIHFEILYNKDRIIDVFIRNDPNAVVDLTEDREVNVDFTYSVKWTKTDIPFEKRLEKYSQTSSLHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEAVDDQEESGWKYIHGDVFRYPRYKSLFAAALGTGTQLFTLAIFIFMLALVGVFYPYNRGALFTALVVIYALTSGVAGYSAASFYYTIEGKNWVKILVLTGSLFSGPLFLTFCFLNTVALAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPQLPWYRRTLPQMAMAGFLPFSAIYIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFVTVALTYFQLATEDHDWWWRYV. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01209 523 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 24 521 IPR004240 GO:0016020
Seca8g01209 523 Pfam Endomembrane protein 70 54 521 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01209 Seca-Chr8 18701914 18706103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01209 12 521 Miscellaneous Gene Families AT5G37310 76.321 0.0 821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01209 8 18701914 18706103 Seca8g01209 8 18701914 18706103 ECH