Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00628 ATGATGATGTTTGATGACATGGGGTTTTGTGGTGATTTGGATATGTTATGTGGCCCCCTTGGGGAAGGGGATATTACTGTCAGGCAAACTGAACCAGAAGCAGTAGTTGAGGATGATTATAGTGATGAAGAAATTGATGTGGATGAGCTTGAGAGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAACAAACTAAGGCTAAGGAAGGAATTGATGCTGCGAAGCAAAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTCTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCAGTGACTGGGGCTTCCGACAATCTTCGTGAATGGTGGAAAGATAAGGTTAGGTTTGATCGAAATGGTCCGGCTGCCATAGCCAAGTATCAAGCAGATAACGCAATTCCAGGAAAGAATGATGGCTGCAATTCCATCGGTCCAACTCCACACACCTTGCAAGAGTTGCAGGATACAACCTTGGGTTCTCTCTTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGACGGTTCCCATTAGAGAAAGGTGTTCCTCCACCATGGTGGCCCACAGGGAATGAAGAATGGTGGCCCCAAATTGGTTTACCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTGAAAAAGGCATGGAAGGTTGGCGTTTTAACTGCAGTTATCAAACACATGTCTCCTGATATTGCCAAGATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCAACCTGGCTTGCTATCATCAATCAAGAGGAGGCCTTAGCTCGAGAGCTCTATCCTGATTATTGCCCCCCATTATCCTCTGGTGGAGGTAGCGGGTCTTTGGTCATCAATGATTGCAACGAGTATGATGTTGAAGGAGCTGACGATGAGCCAAACTTTGATGTGGAGGACCGAAAACCTGAGAATCTTCATCCATCCAATCTTGGGATGGACAGAATGAGGGGAAGGCTGCCAGTTCAGCAACCTTCTCATCCAATCAAGGGAGAGGTTGTGACAAACTTGGATTTCATTCGCAAGAGGAAGATCTCTAGTGACTTTAACATGATCATGGATCAGAAAATTTACACATGTGAACATCCTCAGTGCCCTTACAGTGAAGTTCGCCTTGGTTTTCAAGACAGGTCTTCTAGGGACAATCATCAATTGAATTGTCCTTATAGAAACAGTTCTGCAGATTATGGTGGTCCTAATTTTCATGCTACTGAGGTTAAGCCTGTTATATTCCCCCAGTCCTTTGTCCAACCCAACACTACAGCTCAGCCTGCTAGTTTGGTTCCACCTTCATTCGATCTATCAGGGCTTGGAGTTCCAGAGGATGGCCAGAAAATGATTAGTGACCTTATGTCAATCTATGATACAAATGTTTTAGGAAACAAGAACATGAGTTCCGCCAACTGTGTAGCTGCAGAAAATCAAAACCTTTCTCAGCCCAACATTCAGCAACAACAGGGCAATTTCTTTTCTGGTCAAGGAATGGTGATGGAAGGAAACTTCTTTGCACGAGAGGAAGGTCAATTTGACCGGTTCAAGGCTATGAACTCTCCTTTTGAGACCAACCACAACAACAATAATATCAATCTGATGTTTGGCTCTCATTGTGACTTGGCATCCTTTGATTTTAAGGAGGATATACAAGGAGTAGGGATGGATACACTTCACAAACAACCAGATGTTTCAATATGGTACCAGTGA 1824 0.443 MMMFDDMGFCGDLDMLCGPLGEGDITVRQTEPEAVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSGGGSGSLVINDCNEYDVEGADDEPNFDVEDRKPENLHPSNLGMDRMRGRLPVQQPSHPIKGEVVTNLDFIRKRKISSDFNMIMDQKIYTCEHPQCPYSEVRLGFQDRSSRDNHQLNCPYRNSSADYGGPNFHATEVKPVIFPQSFVQPNTTAQPASLVPPSFDLSGLGVPEDGQKMISDLMSIYDTNVLGNKNMSSANCVAAENQNLSQPNIQQQQGNFFSGQGMVMEGNFFAREEGQFDRFKAMNSPFETNHNNNNINLMFGSHCDLASFDFKEDIQGVGMDTLHKQPDVSIWYQ. 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00628 607 MobiDBLite consensus disorder prediction 334 356 - -
Seca8g00628 607 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Seca8g00628 607 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Seca8g00628 607 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Seca8g00628 607 MobiDBLite consensus disorder prediction 67 91 - -
Seca8g00628 607 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Seca8g00628 607 Coils Coil 33 67 - -
Seca8g00628 607 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 568 IPR006957 GO:0003700|GO:0005634
Seca8g00628 607 FunFam Ethylene insensitive 3-like 1 168 305 - -
Seca8g00628 607 FunFam Ethylene insensitive 3-like 1 80 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00628 Seca-Chr8 7693123 7696334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00628 2 606 EIL Transcription Factor Family AT3G20770 61.196 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca8g00628 EIN3 2.8e-131 No_clan