Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03922 ATGAGGGCAATCAATCTTATTCGTGAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTCGAGTTGAGGGTGCAAATGCAAATGCTGAAGCTTTATTGATTGGATCTCACTTGGACACTGTTGTTGATGCCGGGATGTTTGATGGATCACTAGGAATAATCACTGCAATATCTGCATTAAAGGCTATGCATGTCAATGGAAAGCTGCAAAAGCTAAGGCGCCCTGTTGAGGTGATTGCATTTAGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGCAGTGGTGCTGTAGCTGGTATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGGAATATAACAATAAAAGATGTTCTTAAGGAGAACTCAGTAGAAACTACAGAGGGAAGTTTTTTACAGCTCAAGTATGACCCAAAATCTGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGCGGTTAAAGGCATAGCTGGGCAGACGCGATTGAAGGTTACAGTTAGAGGCTCACAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGCCAGGATCCAATGGCTGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGTAAACATCCTGAAGAATACCTTTCTTATGATAGTCATTGCAGTGATTCATCTGTGAAATCACTCTCAAGTTCACTTGTCTGTACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGTTACATATACCATGGATATACGAGCGATTGATGACCTTGGACGCGAGGCTGTTATCTTTGATTTATCCAAACGAATTTATGAAATATGTGACAAGCGTTCAGTTTCCTGCATTATTGAACACAAGCATGATGCAGGTGCTGTGCTATGTGATCCTGAACTGAGTTCACAGCTCAAATCTGCAGCTTATTCTGCACTGAAGAGAATGGAGGGTGACATTCAGGATGAAGTACCAACACTAATGAGTGGAGCAGGGCATGATGCAATGGCAATATCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGGTGTCGTGGAGGCATAAGTCACTCTCCACAAGAGCATGTGCTAGACAATGATGTTTGGGCAGCTGGTTTAGCAACCTTGTCATTTCTGGAAAATTTGTAA 1209 0.4301 MRAINLIREWMEDAGLRTWVDQMGNVHGRVEGANANAEALLIGSHLDTVVDAGMFDGSLGIITAISALKAMHVNGKLQKLRRPVEVIAFSDEEGVRFQTTFLGSGAVAGILPATTLEISDKRNITIKDVLKENSVETTEGSFLQLKYDPKSVWGYVEIHIEQGPVLEQVGFPLGAVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVLMESLCKHPEEYLSYDSHCSDSSVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTMDIRAIDDLGREAVIFDLSKRIYEICDKRSVSCIIEHKHDAGAVLCDPELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENL. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03922 402 CDD M20_bAS 1 400 - -
Seca6g03922 402 NCBIfam hydantoinase/carbamoylase family amidase 3 395 IPR010158 GO:0016813
Seca6g03922 402 FunFam Allantoate deiminase 181 313 - -
Seca6g03922 402 Pfam Peptidase dimerisation domain 181 291 IPR011650 -
Seca6g03922 402 SUPERFAMILY Bacterial exopeptidase dimerisation domain 181 312 IPR036264 -
Seca6g03922 402 PIRSF Amidase_hyd_carb 1 402 IPR010158 GO:0016813
Seca6g03922 402 Pfam Peptidase family M20/M25/M40 41 391 IPR002933 GO:0016787
Seca6g03922 402 SUPERFAMILY Zn-dependent exopeptidases 2 402 - -
Seca6g03922 402 Gene3D - 181 313 - -
Seca6g03922 402 Gene3D Zn peptidases 2 392 - -
Seca6g03922 402 PANTHER ALLANTOATE DEIMINASE-RELATED 2 400 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03922 Seca-Chr6 106905872 106910696 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03922 6 106905872 106910696 Seca6g03922 6 106905872 106910696 ECH