Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02976 ATGGCATTTGCAGAATCACGTATGTTGACGTCTTATAATGATGTCAAGGATCGTGTCACTGAGTTCGCTAGGGGATTTAACTACAATTACTACCAACCCCTGCATGAAGCAATACTAAAAGGTGATTGGGAATCTACAAAAGCTTTCTTTGATGATGATCCAAGTGCATTGACAGCGAAGGTCACTGCACTTGGCAGGACTGCACTGCATGTTGCAGCTGTACGAGGTAAGTGGCAACTTGTTGAGAAGTTGGTGCAACATATGCCTGCACATGTACTTGAAGAGAAGGACTTTATGGGATGTACTTGCCTGCATTATGTTGCAATGGGTGACAAAATAAAGGCTGCTAAGGCATTGGTGGCTAAAAAACCTTCTCTGACACAGCTTGGTGACTGTAAAAACTTCACGCCACTCATCTATAGTATTATCTCTAGTAGATGTAAAAAGATGGTGTGGTATCTTGTTTTGAATACTTCAGACGAGGGACCTGGCTGTCCATTCTCTGGTCCTTCTGCAGGTCAACTTGTTGCTTTGCTTACTGCTGCCGGATTTCATGATATTACCATGTATCTTCTACGGCACTACCCTAACTTGGCCACTCTTTCTGATTCAAAAGGAAGCATTATACTAAATGTTTTGTCAAAATTGCCCTCAAACTTCCAAAGTGGAAGTAAGCTTGGGTTGTGGGAAAGATGCATTTACCCCTATGTTCCAGCGAAACCTGATTATTTACCACCTACTGAGCTGAGAGGAGATTTGAAAGATTCTTATGGGGAGTCAAGCCATGACCAATCATCTTTTGGAGATAGAATATGGAACGCAATCCAGTGTCTTGAAAAAGAAATAACTTCATTTGCAGTTCCTAAAGTAAAGCGAGTTAGAGATGCAAAGTTGAAACACGAATCTGCCATGAGTTTGTCTTTTGTGAGTAAATACATTATTCTCAATGCCACATCATCTGGCATTGTTGAAATTTTAAGGATTTGTTTCCACCTTTTTCCTGAATTGGTTTGGACTGACATACCAAATGAAGGATATGTAGTTCAAATTGCCATCAATAATCGACAAGAACAGGTTTTTAGTTTTCTACGTGATGAAATGCCAACAATTTGCAAGTATTTAGCCGTGGCATTAGATGAACCATCCAACAGCACATCACATCTAGCAGCAAGGTTTGCTTCTCCTCAACTAGCATCAATTTCCGGTGCAGCATTTCAAATGCAAAGAGAGTTACAATGGTTTAAGGAAGCAGAGAAATTGGATCATCCTCTTGATAAAGAAGTAAAAAACAAAGATGGTAAAACAGCTTGGCAGTTGTTCAAAGAAGAGCACAAGACATTGCTTGAAGAAGGGAAAAAATGGATGAAGAATACATCAAACTCTTGTATGTTAGTGGCAACTCTTATTGCTACAGTTGCCTTTGCTGCTGCTATCACTGTACCTGGAGGTAACCATGAGAGTAAAGGAATTCCAATATTCTTGGAGTCACGGTATAAAACATTTATGGTGTTTGTTGTGTCAGATGCATTAGCTTTGTTTTCTTCAATGGCTTCCCTTTTAATGTTTTTATCAATCCTAACTGCACACTACGCTGAAGAAGATTTTCTCAAGGCTTTACCTGAGAGATTAATATTAGGTCTAGTTTCTTTGTTCATTGCTATAGTGACTACAATGATAGCATTTGGTACAGCTCTGTCTTTGTTCCTAGAGGATAAAGCAAAATGGGCCCCAATTCCAATTGTTCTTCTAGCTTGTGTCCCAATTGCTCTTTTTGCAAAGCTTCAACTTTCCTTACTCATGCAAATGATCATCTCAACATATGGATCCCCCATATATCATCATCAAAGTAAGTCTTTATTGATCTTCCAGAACCTTAAAAACAAGACAAAGCATGGAAAACAAAAGCTTTGTGGTGTAGCCAGCGAGTGTTAA 1932 0.3934 MAFAESRMLTSYNDVKDRVTEFARGFNYNYYQPLHEAILKGDWESTKAFFDDDPSALTAKVTALGRTALHVAAVRGKWQLVEKLVQHMPAHVLEEKDFMGCTCLHYVAMGDKIKAAKALVAKKPSLTQLGDCKNFTPLIYSIISSRCKKMVWYLVLNTSDEGPGCPFSGPSAGQLVALLTAAGFHDITMYLLRHYPNLATLSDSKGSIILNVLSKLPSNFQSGSKLGLWERCIYPYVPAKPDYLPPTELRGDLKDSYGESSHDQSSFGDRIWNAIQCLEKEITSFAVPKVKRVRDAKLKHESAMSLSFVSKYIILNATSSGIVEILRICFHLFPELVWTDIPNEGYVVQIAINNRQEQVFSFLRDEMPTICKYLAVALDEPSNSTSHLAARFASPQLASISGAAFQMQRELQWFKEAEKLDHPLDKEVKNKDGKTAWQLFKEEHKTLLEEGKKWMKNTSNSCMLVATLIATVAFAAAITVPGGNHESKGIPIFLESRYKTFMVFVVSDALALFSSMASLLMFLSILTAHYAEEDFLKALPERLILGLVSLFIAIVTTMIAFGTALSLFLEDKAKWAPIPIVLLACVPIALFAKLQLSLLMQMIISTYGSPIYHHQSKSLLIFQNLKNKTKHGKQKLCGVASEC. 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02976 643 Gene3D - 5 162 IPR036770 -
Seca6g02976 643 Pfam Domain of unknown function 452 566 IPR026961 -
Seca6g02976 643 SMART ANK_2a 64 95 IPR002110 GO:0005515
Seca6g02976 643 SMART ANK_2a 99 128 IPR002110 GO:0005515
Seca6g02976 643 SMART ANK_2a 29 59 IPR002110 GO:0005515
Seca6g02976 643 SUPERFAMILY Ankyrin repeat 33 437 IPR036770 -
Seca6g02976 643 PANTHER CASKIN 63 608 - -
Seca6g02976 643 ProSiteProfiles Ankyrin repeat profile. 64 87 IPR002110 GO:0005515
Seca6g02976 643 ProSiteProfiles Ankyrin repeat region circular profile. 64 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02976 Seca-Chr6 95748180 95751985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02976 317 589 Miscellaneous Gene Families AT3G12360 22.571 3.66e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02976 6 95748180 95751985 Seca6g02976 6 95748180 95751985 ECH