Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03471 ATGATGATGATCTTTGATGAGATCGGGTTATCTGGTGATTTGGATATGTTGTCTGCTCCCCTTGGAGAAGGGGATATTACCGCCCGGCAAACTGAGCCAGAGGCGATAGTTGAAGATGATTATAGTGATGAAGAAATTGATGTGGATGAGCTTGAGAGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTAAAGGAACAAAGTAAAGCTAAGGAAGGAATCGATGCAGCGAAGCAGAGGCAGTCCCAAGAACAGGCCAGAAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTCAAAATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCAGTAACTGGAGCATCTGATAATCTGCGTGAATGGTGGAAGGATAAAGTTAGATTTGATCGCAATGGTCCAGCTGCCATAGCCAAGTATCAAGCAGATAATGCAATCCCAGGGAAGAATGATGGATGCAATCCTATCGGTCCAACTCCACACACCTTGCAAGAGCTACAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGTGACCCTCCTCAGAGGCGGTTTCCATTGGAAAAAGGCATTCCTCCACCATGGTGGCCCACAGGAAATGAAGAGTGGTGGCCACAAATTGGTTTACCCAAAGATCAAGGTCCTCCGCCTTACAAGAAACCTCATGACCTGAAGAAGGCATGGAAGGTTGGTGTTCTAACTGCAGTTATCAAGCACATGTCTCCTGATATTGCCAAGATCCGCAAGCTTGTGAGGCAATCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCAACCTGGCTTGCCATCATCAATCAAGAGGAGGCCTTAGCACGCGAGCTTTACCCTGATTACTGTCCCCCATTGACCTCAGGTGGAGGCAATGGATCTTTACCCATCAATGATTGCAATGAGTATGATGTTGAAGGGGGTGAAGATGAGCAAAATTTTGATGTGGAAGACCGGAAGCCTGAGAATCTTCATCCATCCAATCTTGGGATGGAGAGAATGAGGGTAAGACTGCCAGTTCAGCAGCCTTCTTTCCCAATCAAGGGAGAGGCTGTAACAAACTTGGACTTCATGCGGAAGAGGAAGATCCCTAGTGACTTCAACATGATGATGGATCAGAAAATTTACACATGTGAACACCCTCACTGTCCTTACAGCAAAGTTCGCCTTGGTTTTCAAGACAGGAATTCTAGGGACAATCATCAATTGAATTGTCCATATAGAGGAACTTCTTCAGATTATGGTGGTCCAAATTTTCATGTGAATGAGGTTAAGCCAGTAATATTCCCCCAGTCCTTTGTTCAACCAAAATCTACTGCTCAGTCTGTTAGTATGGTTCAACCTTCAATTGATCTAACTGGACTTGGAGTTCCAGAAGATGGCCAGAAAATGATTAGTGACCTTATGTCAATCTATGATACAAATGTTCAAGGCAACAAGAACTTGAGTTCCAGCAATCGCGTAGCTGCAGAAAATCAGAACCTTCCTCCTCAGCCTAGCATTCAGCAGCAACAGGACAACAATTTCTTCCGTGGTCAAGGAATTGTGATGGAAGGAAACTTCTTTGAAGAAGCCAACATGTCCAATAATAATCATCACATGTTTGCAAGAGAGGAAGGTCAATTTGACCGGTTCAAAGCTTTGAATTCCCCTTTTGAGTCCAACCACAGCAACAACAATAATTTCAATTTGATGTTTGGGTCCCCTTGTGATTTGGCATCCTTTGATTTTAAAGAGGATATGCAAGGAGTAGGGATGGATGCTCTTCATAAACAGCCAGATATTTCAATATGGTACCAGTGA 1875 0.4416 MMMIFDEIGLSGDLDMLSAPLGEGDITARQTEPEAIVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKAKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLTSGGGNGSLPINDCNEYDVEGGEDEQNFDVEDRKPENLHPSNLGMERMRVRLPVQQPSFPIKGEAVTNLDFMRKRKIPSDFNMMMDQKIYTCEHPHCPYSKVRLGFQDRNSRDNHQLNCPYRGTSSDYGGPNFHVNEVKPVIFPQSFVQPKSTAQSVSMVQPSIDLTGLGVPEDGQKMISDLMSIYDTNVQGNKNLSSSNRVAAENQNLPPQPSIQQQQDNNFFRGQGIVMEGNFFEEANMSNNNHHMFAREEGQFDRFKALNSPFESNHSNNNNFNLMFGSPCDLASFDFKEDMQGVGMDALHKQPDISIWYQ. 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03471 624 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Seca5g03471 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 17 604 IPR006957 GO:0003700|GO:0005634
Seca5g03471 624 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Seca5g03471 624 FunFam Ethylene insensitive 3-like 1 170 306 - -
Seca5g03471 624 Coils Coil 34 68 - -
Seca5g03471 624 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Seca5g03471 624 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Seca5g03471 624 MobiDBLite consensus disorder prediction 65 92 - -
Seca5g03471 624 FunFam Ethylene insensitive 3-like 1 81 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03471 Seca-Chr5 91589095 91590969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03471 3 623 EIL Transcription Factor Family AT3G20770 62.462 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca5g03471 EIN3 5.5e-131 No_clan