Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02375 ATGGTGGTGATCAATGAAGAAATCGACCCCTATGCACAAGAACTAGAATCTGATGAGGACACAGCAGCTGAAAACATTGACTATGACCAGCTCAAGAAGCGCATGTGGAAGGATCGGATCCTTCTTCAGAAGCTGAAGGAAAAACGTGACAAAAATGAGCCAGAGGAACAGGCAAAACTAGAGGCATCAAGAAGGAAGAAGATGTCAAGAGCACAAGATTCAGTCCTCAAGTACATGGTGAAGATCATGGAGGTTTGCAATGCTCAAGGTTTTGTATATGGGATTATCCCAGAGAAAGGGAAACCAGTCTCTGGTTCCTCTGAAAGCTTAAGAGGTTGGTGGAAAGATCAAATCCGTTTTGATCAACATGCCCCTGTTGCACTAGCCAACATCTTACCACTCTTGGAAAAAGATGAGAATTTGGATCCAACTTCCTACATACACCTCCTTCAAGACTTGCAAGATTCCACACTTGGCTCTCTCCTTTCTGCTCTCATGCAACACTGTATCCCTCCACAGAGAAGGTTCCCTTTAGAGAGGGGAATCTCTCCTCCTTGGTGGCCCACAGGGGATGAAATTTGGTGGGGTGAGCAAGGACTATTGGCTCAAGAACAAGGTCCACCTCCTTATAAGAAACCCCATGATCTCAAAAAGGCTTGGAAAGTGTCTGTTTTGGCTGCAGTCATCAAACACATGTCTCCTGATTTGGAGAAACTTAGAAGGTTGGTTACTCAATCCAAGACCTTGCAAGATAAGATGACAGCTAGAGACACTGCAACTTGGTCCAAAGTCATGAACCAAGAAGAAGCCTTGTTACAACTAACTAACAAATGTCTCAAAATATCTCCATCAGAGGAAGATGAAAAAGAGGAGGAGGAAGGTGAATGCTCTGCTCCTGTTTTGAATGTTGTGGATGTGGATGAATCAGTTTCAGGTAGTAGTAGTAAAAGTGAGAAAAGGAAGTGTGAGTTTGAACTTGGTGATGCTGAAGATAAGCTATATGCTTGTCAAAACACAGAGTGTCCACAGAGTGAACTGTCTATGGGATTTATTGATAAAAACTTGAGGATGGACCATGAATCTCTTTGTGCTTACCGTACTGAGGGAAGCAATGTTCTCTTGGATGAGAATATCTCCAATGATGCACCAATCACAGGTTTAGATGATTGGTTTAATATGGAGTTAGCAAAGGCTAATCAGAATGATGTGGGGGATATTGAAGGTGGGACATTTGAATACAACTTAGCCAACTGGCTGAATGGCATTGAAGACAATGAATTGCTAGCAGCATTGGAAATGGTTAAAGGTAACATAGACTTGACTGAAAATCCAGTGCAGATCCCACAAGGCCGAGAGGAAGCAACCTCAATTTGGGACTATGCATACCATCCAGCTCAACAGTAG 1404 0.4302 MVVINEEIDPYAQELESDEDTAAENIDYDQLKKRMWKDRILLQKLKEKRDKNEPEEQAKLEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSESLRGWWKDQIRFDQHAPVALANILPLLEKDENLDPTSYIHLLQDLQDSTLGSLLSALMQHCIPPQRRFPLERGISPPWWPTGDEIWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLAAVIKHMSPDLEKLRRLVTQSKTLQDKMTARDTATWSKVMNQEEALLQLTNKCLKISPSEEDEKEEEEGECSAPVLNVVDVDESVSGSSSKSEKRKCEFELGDAEDKLYACQNTECPQSELSMGFIDKNLRMDHESLCAYRTEGSNVLLDENISNDAPITGLDDWFNMELAKANQNDVGDIEGGTFEYNLANWLNGIEDNELLAALEMVKGNIDLTENPVQIPQGREEATSIWDYAYHPAQQ. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02375 467 Pfam Ethylene insensitive 3 30 269 IPR047091 GO:0003700
Seca5g02375 467 SUPERFAMILY DNA-binding domain of EIN3-like 147 272 IPR023278 GO:0003700|GO:0005634
Seca5g02375 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 371 IPR006957 GO:0003700|GO:0005634
Seca5g02375 467 Gene3D - 140 278 IPR023278 GO:0003700|GO:0005634
Seca5g02375 467 Gene3D - 58 134 IPR023278 GO:0003700|GO:0005634
Seca5g02375 467 MobiDBLite consensus disorder prediction 46 66 - -
Seca5g02375 467 FunFam Ethylene insensitive 3-like 1 141 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02375 Seca-Chr5 66145038 66146441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02375 23 459 EIL Transcription Factor Family AT5G65100 44.551 9.78e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca5g02375 EIN3 1.1e-113 No_clan