Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01643 ATGGATCATGAAAGTCTAGATGAGCTGAGTTCCTATGGAATGATTGACGATGTGCAACTTATAGTATGTCAATACGTTGAACCACATGCAAACATAGGCATGTGGCATGGAGATAATCACCTCCATCATACCACATCTGTCATAGCACTTCAGATTATTCTTATATTCCTTCTAAGTAGAATTACTCATTTCTTGTTAAGGCCTTGTCATCAAACTCTGCTCATTTCACAAATTGTGGCTGGTATCATATTGGGTCCTATATTTCTAGGTCGGCACCAAATTCATGAGTTGCTATTTCCAATAGCAAGCAGAATGACACTTGCAACATTTGCAGAATTTGGCATGGTACTTAACTTCTTTAAGATGGGGGTGCAAGTAAATCCCAAATTGATCTTGAAGATTGAAAAGGAGGCAGTGGCAATTGGTATAGTAGGCTATTTGTCTTCTTTTGTGCTTAGCAGTGTAGTTTTGAATGTTGTTGATATAATCTCCCCTCTGGGACCTCAAGATGCTGGAATTCATGGTTTGGTAATTGCTAGTGCTCAAACTGCATTTCCTGTTATAAGTAGCTTCCTCAATGAGATGAACATTCTCAATTCAGAGATTGGACGCATGGCTTTATCCACTTCTATGGTCAGTGATGCATGCAATTGGGTATTTTATTTTGTCATAAAGAATGTTGGTAGTGCCTTGGAGCAAAAGTCATATAAACCTGTCCTGCAGATTGTTGTCTCATTTTGTTATTTCTCAATCTTATTCTTTATGCTAAGGCCATTGGTTATATGGATCTCCAACCGCAATCCAAAAGGAAAGCCTATGACACAAAACCATTTCTTATCAATCATTTGTATACTTCTATTTGTTGGATTCTCTGCACAAGTTGCTGGTCAACCTTCTTTCCTTGTTGCTTTTTGGTTTGGCTTGATCTTACCTGATGGTCCCCCTTTAGGTTCTGTTCTGGCAGAAAGGATTGATACTGTTGGTTCTGCTTTGATTGTTCCAGCTTACTGTACAATTAGTGGATTGAAGACAAATGTTCCTTCATTAGCAGGATCAAAGTCAGCAAGCATAGAGTTTATCATAATTGCAGGGTATATAGGAAAGTTTATAGGCACCATTTTACCCTCACTTCATTTTAAGATTGAATCCAGGGATTCTTTTGCACTGTCCCTAATCATGTGCTGCAAAGGCATTATAGATCTCAACATATTCAACACATTATTGACCGTTAAGGTACGTTTGAAGAATTTGACTCCACTAAAGTGA 1266 0.3815 MDHESLDELSSYGMIDDVQLIVCQYVEPHANIGMWHGDNHLHHTTSVIALQIILIFLLSRITHFLLRPCHQTLLISQIVAGIILGPIFLGRHQIHELLFPIASRMTLATFAEFGMVLNFFKMGVQVNPKLILKIEKEAVAIGIVGYLSSFVLSSVVLNVVDIISPLGPQDAGIHGLVIASAQTAFPVISSFLNEMNILNSEIGRMALSTSMVSDACNWVFYFVIKNVGSALEQKSYKPVLQIVVSFCYFSILFFMLRPLVIWISNRNPKGKPMTQNHFLSIICILLFVGFSAQVAGQPSFLVAFWFGLILPDGPPLGSVLAERIDTVGSALIVPAYCTISGLKTNVPSLAGSKSASIEFIIIAGYIGKFIGTILPSLHFKIESRDSFALSLIMCCKGIIDLNIFNTLLTVKVRLKNLTPLK. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01643 421 Gene3D - 45 417 IPR038770 -
Seca5g01643 421 Pfam Sodium/hydrogen exchanger family 52 402 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g01643 421 PANTHER CATION/H + ANTIPORTER 14 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01643 Seca-Chr5 49982425 49985689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01643 18 401 Antiporter Super Family AT1G06970 31.783 1.59e-60 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01643 K26731 - gmx:100804488 556.214