Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12107 ATGAGTTTGATTACCACTGCCACGGACCTTCCAAGCCACGCCACAATGAACAAGATGGGGCAGAGATTCTTTGTTGTATTTTTCATAGCGTTTCCAGTTCTCATGGTTACTTTGATGTACCCAAACTCAACCTTCACTCTTTTTTATGGCTCATCCAAAGGCAAAGTACTCGAAGAAGATAAACCTCACAACATTACAACCAACAGCCTTCCATTGGGAAGAACCAATAATAATACCGTCACACTGTCAGAGTCAGAGGTGCGAGGGAAAATTGAAAATGGTACCACTACCAAATCTACAAATGATTCAGGGATCCCTGATGACAGAGACAAACTGCTTCATGGACTGTTAGCTTCTGGATTCGACGAAGCATCATGCATAAGCAGGCTGCAATCCTACTTATACCGCAAAGCAGCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTACGCAACTATGAAGAAATTCACACAAGGTGTGGACCTAATAGTAGAGCTTACAACAGAAACATGATAAGGATTGTGCATTCTAAGAACAATGGTAATGGTGTTACTGCTGCAATGTGTAAATACCTTGTCTGGACCCCTGTCAATGGTTTGGGAAACCAAATGATTAGCATTGCAGCAACATTTCTTTATGCAATCCTCACAGACCGAGTTTTGCTTGTAAGATTTGGGAAAGACAAACACGGCCTATTTTGTGAGCCTTTTCTCAATTCAACTTGGATATTGCCTGAAAAGTCTCCCTTTTGGAATGAAAATAATGTCCAAACATATCAGAGAATGCTAGAGAAGGACAGGGCTAGTGCTAACAATTCAAAAGAGGATCATAAGGGTTTACCATCAGCACTGTTTCTTAATCTACAACATACCCGCAGTGATCCAGAGAAATTATTTCACTGTGATCATAGTCAAGATCTTCTCCGAAAGGTTCCTTTGTTGATTTTGCAGTCTGATCAGTATTTTGTCCCTTCTCTGTTCATGACCCCATCTTTCAACTTGGAAATTACCAAAATGTTCCCAGAAAAAGCGACAGTGTTCCATCACTTGGGGCGTTATCTATTCCACCCTTCAAATGAGGCATGGGGACTAATCAGCAGATTCTATAAGGCACACTTGGCCAAAGCAGATGAGAGGATAGGCCTTCAGATAAGAGTGTTTCGTCCTGTTTCCACTCCACCGCAAGCAGTTATGAATCTAGTTTTGAGTTGCACCATAATGAATAAGTTACTGCCAGAAGTAGTAGCAATGCAAAATTCAGTGTCTTCTGCTACCAAAAACCAGATGGTAAAGGCTGTTCTTGTGGCATCTCTATATGCAGAGCATGGAGAGATTTTACAGACTAAGTATCTGAAAAAACAAAGTGCTACTGGGGAAGTAATAGAGGTTTATCAGCCTAGTCACGAAAGGCGTCAAAAGTATAATGATAATAAGCACAATATGAAGGCGTGGACGGAGATGTATCTGCTAAGTTTATCTGATGTGTTGGTGACTACCTCTCTATCTACATTTGGGTATGTTGCTCAGGGTTTGGGGAATTTGAGGCCATGGCTTCTTTACAAGCTAACAAATAACGAGACCCATTTTCCAGCATGTGAACGGGACTTTTCATTGGAGCCTTGTTATCACACTCCTCCCAAGCATTACTGCAATGGAAAGCCCATCAAAGATTTTGCTTCTTCTTTCCCTTATATGAGGGAATGCAAGGATTTTCGTTTTGGTGTGAAGCTGGTGAATGATATTTCACTGCAAGCTACTGGAATGGGTATAATCAGGAGTTGCTTCTCTTTCATAGCAGGGACAGTCTTTGGGGTTTACTTGGCTCAGAACTATCAAGTTCCTAACCTCAGGAAGGTAGCTGACACTGCCTTGATCGAGGCGAAGCAAGTTGAGGGAAAATACCGCAAGAATAAGAAGAAGGGTGGTGATGATGATAACTACGATTAG 1953 0.4153 MSLITTATDLPSHATMNKMGQRFFVVFFIAFPVLMVTLMYPNSTFTLFYGSSKGKVLEEDKPHNITTNSLPLGRTNNNTVTLSESEVRGKIENGTTTKSTNDSGIPDDRDKLLHGLLASGFDEASCISRLQSYLYRKAASPHKPSPYLISKLRNYEEIHTRCGPNSRAYNRNMIRIVHSKNNGNGVTAAMCKYLVWTPVNGLGNQMISIAATFLYAILTDRVLLVRFGKDKHGLFCEPFLNSTWILPEKSPFWNENNVQTYQRMLEKDRASANNSKEDHKGLPSALFLNLQHTRSDPEKLFHCDHSQDLLRKVPLLILQSDQYFVPSLFMTPSFNLEITKMFPEKATVFHHLGRYLFHPSNEAWGLISRFYKAHLAKADERIGLQIRVFRPVSTPPQAVMNLVLSCTIMNKLLPEVVAMQNSVSSATKNQMVKAVLVASLYAEHGEILQTKYLKKQSATGEVIEVYQPSHERRQKYNDNKHNMKAWTEMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYKLTNNETHFPACERDFSLEPCYHTPPKHYCNGKPIKDFASSFPYMRECKDFRFGVKLVNDISLQATGMGIIRSCFSFIAGTVFGVYLAQNYQVPNLRKVADTALIEAKQVEGKYRKNKKKGGDDDNYD. 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12107 650 Gene3D - 189 242 - -
Seca4g12107 650 Pfam Domain of unknown function (DUF4535) 595 638 IPR027854 -
Seca4g12107 650 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca4g12107 650 Pfam Xyloglucan fucosyltransferase 95 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca4g12107 650 FunFam Galactoside 2-alpha-L-fucosyltransferase 189 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12107 Seca-Chr4 261988219 261991809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12107 110 580 Xyloglucan Fucosyltransferase1 AT2G03220 49.686 2.02e-159 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12107 K13681 - gmx:100818288 772.696