Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09783 ATGGCTACCCAGACAATAGCTGAAACTGCACAGAAAATTGTCACCCATGAAACCCTCCGCTCTGCAGCCAAACAATCCCAACGTTGCCTCGTTGTCCCTGTCAGTCTCCGCCGTGCCATTAAAAAATACCTTCAAGAGCAGGAGGAGCCATATATGAAGAGGAAAGTCTTGAGATTGTCTCAATCATTTAATGAAATCAAGAATGTCAATCTACAGCTGACAACCACCACATCGAGGGAGATAGTTGAAGACCCTTTAAAGTCTTTGGAACAATCAAAACGTTGGAAGATCAAGAGCTCGTATGGCGACATTGGTCTCACATACAGAGATGAGGAGACAATTGCTTATGTGGCTTCTCGAATGCCTGCAGTTTACTCTGCTTGTTACAGAGTACTTAAAGAGGTTCGTAGAAGGCTTCCTGGTTTCTCCCCAGCTAAGGTATTAGATTTTGGTGCTGGGACAGGTTCAGCTTTCTGGGCTCTGCGAGACGTTTGGCCAAAATCTTTAGAGAAAGTTAATTTAATTGAACCATCACAGTCAATGCAGCGTGCAGGTCAGAGCCTCATACAAGGTCTCAAGAATTTGCCACTTATTCATAGCTATGATAGCATTCAAGCTCTATCTAAAACTATCGGCAAATCGGAGAGAGGGCATGACCTTGTAATTGCTTCCTATGTGCTTGGAGAGATCCCGTCACTAAAGGATCGAATTACCATAGTTCGCCAACTTTGGGATCTTACGCAGGATGTTCTGGTTTTGGTTGAACCTGGAACACCTCATGGATCTAGTATTATAGCTCAGATGAGATCTCACCTATTATGGATGGAAGAAAGAAAATACCGTAAATCTTCTCATAAGAACAATGAAGTTTGCAAAGATTTGATTACTCAAAAGGCCGGTGCTTTTGTAGTTGCTCCATGTCCTCATGATGGGACTTGTCCACTGGTAAAATCTGGAAAATATTGCCATTTTGTTCAGCGGTTGGAAAGGACATCATCACAACGAACCTACAAGCGTTCAAAGGGTGAGCCTTTACGTGGCTTTGAAGATGAGAAATTTTCATTTGTTGCTTTCAGACGAGGACAAAGACCAAGGCAAGTGGAACCTTGGCCCCTTGATGGTATTACATTTGAAACTCTGAAGGAGCAGCATGCTAAAAGAAATCCGGAGGATCTTGAAATTGACTACGAGGACTGGTTGAAATTGCAACAAGCTGATGATGCTCCACATGAAGTAGTAAATGCAGTAACTTATGATTCTGATGCTGTGGAAACTGATGATGGTGCTGACGATAATGAAAAGGATAAGGAAGAGGAAGGGGAAGAAGAAGCAGCTAGTGCTGATCTTGGAGGTGGCTGGGGCAGAATTGTCTTCATGCCTGTTAGGAGGGGTAGGCAGGTCACAATGAATGTGTGTAGATCCACCAAAAGGGATGCCTCAGAGGGTTCATATGACCGTATTGTTGTAACACAGAGCAAGAATCCTACCTTACACCATCAGGCCAAAAGATCTATTTGGGGTGACCTATGGCCGTTTTGA 1539 0.436 MATQTIAETAQKIVTHETLRSAAKQSQRCLVVPVSLRRAIKKYLQEQEEPYMKRKVLRLSQSFNEIKNVNLQLTTTTSREIVEDPLKSLEQSKRWKIKSSYGDIGLTYRDEETIAYVASRMPAVYSACYRVLKEVRRRLPGFSPAKVLDFGAGTGSAFWALRDVWPKSLEKVNLIEPSQSMQRAGQSLIQGLKNLPLIHSYDSIQALSKTIGKSERGHDLVIASYVLGEIPSLKDRITIVRQLWDLTQDVLVLVEPGTPHGSSIIAQMRSHLLWMEERKYRKSSHKNNEVCKDLITQKAGAFVVAPCPHDGTCPLVKSGKYCHFVQRLERTSSQRTYKRSKGEPLRGFEDEKFSFVAFRRGQRPRQVEPWPLDGITFETLKEQHAKRNPEDLEIDYEDWLKLQQADDAPHEVVNAVTYDSDAVETDDGADDNEKDKEEEGEEEAASADLGGGWGRIVFMPVRRGRQVTMNVCRSTKRDASEGSYDRIVVTQSKNPTLHHQAKRSIWGDLWPF. 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09783 512 Pfam Mitochondrial small ribosomal subunit Rsm22 288 511 IPR015324 GO:0006412|GO:0008168
Seca4g09783 512 Pfam Mitochondrial small ribosomal subunit Rsm22 111 277 IPR015324 GO:0006412|GO:0008168
Seca4g09783 512 Gene3D Vaccinia Virus protein VP39 95 292 IPR029063 -
Seca4g09783 512 PANTHER 37S RIBOSOMAL PROTEIN S22 21 512 - -
Seca4g09783 512 MobiDBLite consensus disorder prediction 419 449 - -
Seca4g09783 512 MobiDBLite consensus disorder prediction 423 445 - -
Seca4g09783 512 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 289 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09783 Seca-Chr4 229798296 229806149 Dispersed/Wgd