Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09766 ATGGGTGCAGCTGAAGATCTTGCAAACATTAAAGTAGAAGGTCCTGTAGATATCCAAGTTTATGATGCAGAAAGTCCTATAAAGGGTCTTGAAGAAACCACTATAAAAGAGAAGGAAGATTATCTTCCAGGTGAAGCAAAGGAGATATTGAAATCATTGGCAAGTAAATGGGAGAATGTATTAGATGTAAATGCATTGCAGGTGATCCCTCTTAAGGGGGCAATGACCAATGAGGTATTCCAGATAAAATGGCAAACAACAGCAGATGAAACCTCACGAAAGGTTCTAGTTAGAATCTATGGTGAGGGTACTGAGATTTTCTTTGATAGGGAAGATGAGATCCGAGCATTTGAATTCATTTCAAAGAATGGACAGGGTCCTAGGTTGCTAGGAAGGTTTGCACAGGGTCGCATTGAAGAATTCATCCGTGCAAGGACATTATCAGCATCTGATCTGCGTGATGCATCTATTTCTGCTCTTATAGCTGCCAAAATGAAGGAGTTCCATGATCTTGACATGCCTGGTCCAAAGAAAGTGTACCTTTGGGATAGATTGAGAAATTGGCTTAGTGAGGCCAAGCGCTTGGCTTCTCCTGAAGAAGCTGAAACATTTCATTTGGACACATTGGAAAAGGAAATCTCTATTTTGGAACAGGAACTATCAGGCACTCACCAACGCATAGGGTTTTGCCACAATGATTTACAATATGGTAACATCATGCTTAGTGAAGAGACCAATTCTGTGACCATAATAGATTATGAATATGCAAGTTATAATCCTGTGGCATATGATATAGCAAACCACTTCTCTGAGATGGTTGCCAACTATCATACTGAAACCCCACATATTCTTGACTTCAGTAAATATCCTGATTTGGAGGAGCGTCAAAGATTTGTGACAACATATTTGAGTTGTTCAGGTGAACAACCTAGTGACAATGAAGTGCAACAGCTACTTGATGAAGTTGAGAAGTATACACTTGCAAATCATCTATTATGGGGCCTATGGGGAATAATTTCGGAGCATGTAAACAAAATTGACTTTGACTACAAGGAGTATGCAAAACAGAGGTTTCAAGAATATTGGTCAAAGAAAACTCATCTTTTCAGCTCTGATGGGTCTTCGGATGATAATGTGACAGATGGTAATGGTACTAATTGGATTGCAATTGTTTTGCTTTACTGCACTATCAATAGATAG 1200 0.3925 MGAAEDLANIKVEGPVDIQVYDAESPIKGLEETTIKEKEDYLPGEAKEILKSLASKWENVLDVNALQVIPLKGAMTNEVFQIKWQTTADETSRKVLVRIYGEGTEIFFDREDEIRAFEFISKNGQGPRLLGRFAQGRIEEFIRARTLSASDLRDASISALIAAKMKEFHDLDMPGPKKVYLWDRLRNWLSEAKRLASPEEAETFHLDTLEKEISILEQELSGTHQRIGFCHNDLQYGNIMLSEETNSVTIIDYEYASYNPVAYDIANHFSEMVANYHTETPHILDFSKYPDLEERQRFVTTYLSCSGEQPSDNEVQQLLDEVEKYTLANHLLWGLWGIISEHVNKIDFDYKEYAKQRFQEYWSKKTHLFSSDGSSDDNVTDGNGTNWIAIVLLYCTINR. 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09766 399 SUPERFAMILY Protein kinase-like (PK-like) 33 366 IPR011009 -
Seca4g09766 399 PANTHER CHOLINE/ETHANOALAMINE KINASE 38 370 - -
Seca4g09766 399 Pfam Choline kinase N terminus 39 65 IPR007521 GO:0016773
Seca4g09766 399 Coils Coil 206 226 - -
Seca4g09766 399 CDD ETNK_euk 66 364 - -
Seca4g09766 399 Pfam Choline/ethanolamine kinase 92 293 - -
Seca4g09766 399 Gene3D Phosphorylase Kinase; domain 1 53 141 - -
Seca4g09766 399 Gene3D - 101 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09766 Seca-Chr4 229384327 229389925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09766 29 371 Acyl Lipid Metabolism Gene Families AT1G74320 68.513 0.0 505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09766 4 229384327 229389925 Seca4g09766 4 229384327 229389925 ECH
Seca4g09766 4 229384327 229389925 Seca4g07502 4 169343651 169351059 PCT