Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09675 ATGTTGGAACTGCCATTCAGAATGACACTTCGCTTCCCCATCTTGGATTTCAAGTCCTTACCCTTTGTTAACAACTTGGAGTCTGAGCTACTTGGTGGTGCTGTTGCTCTTCTTGCCGTGGGCCTCACGGCTTACATTTACTATGGCATGAAAAAACCCAAAGGTTGCTTGGACCCCAAAAATTTCAAAGAATTTAAACTTGTGAAGAAGACCCAGCTCAGCCCCAGCGCTGCAAGATTCAGATTTGCCCTCCCTACCCCTTCTTCTGTATTGGGCCTTCCTGTTGGAAAAAACGTACTAGTCAGGGGAAAAGATAGCCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAGATCTTGGCTACTTTGATTTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGGCAAATGAAGGAAGGTGACAACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGCTTGCTGGTGGTTCAGGTATTACCCCAATGTTTCAGCTCATAAGAGCCATACTAGAAAATCCTAAGGACAAAACGAAGTTGTACCTTATTTACGCCAATGTTACAGAGGACGACATTCTGTTGAAGGAAGAACTAGACACCTTTGCAAACAAATATCCTCACAGTTTCCAAGCCTATTATGTTCTTAATAAGAGTAAAATGTTTAATATCTTCAAACTTGACTTGCAGCCTCCTAATCAATGGAATGGTGGCGTTGGGTTCATATCAAAGGAGATGATTCAATCCCACTGTCCAGCACCAGCCCCAGATGTCCAGATACTTAGGTGCGGTCCACCACCCATGAATAAAGCCATGGCTACTCACCTTGAAGCACTTGGGTACACATCAAACATGCAGTTCGAGTTCTAA 927 0.4412 MLELPFRMTLRFPILDFKSLPFVNNLESELLGGAVALLAVGLTAYIYYGMKKPKGCLDPKNFKEFKLVKKTQLSPSAARFRFALPTPSSVLGLPVGKNVLVRGKDSQGEEVMRSYTPITLDSDLGYFDLVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLIRAILENPKDKTKLYLIYANVTEDDILLKEELDTFANKYPHSFQAYYVLNKSKMFNIFKLDLQPPNQWNGGVGFISKEMIQSHCPAPAPDVQILRCGPPPMNKAMATHLEALGYTSNMQFEF. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 172 191 - -
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 91 102 - -
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 278 286 - -
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 113 120 - -
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 149 163 - -
Seca4g09675 308 PRINTS Cytochrome B5 reductase signature 210 221 - -
Seca4g09675 308 Gene3D - 156 305 IPR039261 -
Seca4g09675 308 Pfam Oxidoreductase NAD-binding domain 173 291 IPR001433 GO:0016491
Seca4g09675 308 SUPERFAMILY Riboflavin synthase domain-like 53 165 IPR017938 -
Seca4g09675 308 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Seca4g09675 308 PANTHER NADH-CYTOCHROME B5 REDUCTASE 52 308 IPR001834 GO:0016491
Seca4g09675 308 Gene3D Translation factors 55 155 - -
Seca4g09675 308 CDD cyt_b5_reduct_like 65 308 - -
Seca4g09675 308 FunFam NADH-cytochrome b5 reductase 55 154 - -
Seca4g09675 308 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 303 IPR039261 -
Seca4g09675 308 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Seca4g09675 308 FunFam NADH-cytochrome b5 reductase 154 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09675 Seca-Chr4 227500038 227508460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09675 45 308 NADPH P450 reductases AT5G17770 67.424 2.40e-134 380