Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09665 ATGGATGTGGAGTGGTCTGAATCACGGTATGAGAGTAGAAAGGATGAAGAGGATTCCCCTGTGAGGGAGCAATATGATGATGATGGAGCAGAGAAATCTAGTAAGCATAGAAGCAAGGATAGGAAGAAGAGTGACAAGGAGCACCGAAGTAAAGACAGGGAACAGCTGAAGAGGGCTGCTGAGGATGTAGAGAAGGATAGAGTGGCTGGCCGGGATCGGAAGAAGGAAGACAGGGATGAACGTGAAAAGGACAGGAGTAAAGATGGTAAGGCGAGGGAGAAGGATTATGATAGAGAGAAATACAGAGAAAAAGAGCGTGAGAGGGATAGAGATAAGAAGGACCGGGGTAAGGATAGGGACCGTGAGAAGGAAAGAGAGACAGAGAAAGATAGTGATAGAGCGCGAGATAAGGAGAGGGGAAAAGAGAAGACCAGGGATAGGGATAGGGATAAGGATAGGGAAAGGCATAGAGATAGAGAAAAGGAGAGGGAAAGTTTTAAAGACGGAGACAAGGATAAGGGGAAAGATAAAGTTAGAGAGAAGGAGAGGGAGACAGATCGAGATAAAGAAAGGTCAAAAGACAGAGTGAGCAGAAAGACTCATGAGGAAGATTATGAATTGAGTAATGTTGATGATAAAGTAGACTACCGTGAAAAGAGAGATGAGGAGGTTGGCAAGCAAGGAAAGACTTCAAAGCTCAATGAAGATGATCAAGATGGTGAAACGTCAGCACCTATGTCATCGATAGTACTTGAAGAACGCATCTTGAAGATGAAAGAAGCAAGGACAAAGAAACAACCTGAAGCTGCTTCTGAGATCTCAGCATGGGTTAATAAAAGCCGTAAGCTTGAAAAGGAAAGAGCATTGCAGCTCTCAAAGATTTTTGAGGAGCAGGACAACATCGCGGTAGAGGGAAGTGATGATGAGGATACAACCCATCACACTGATAACCTGGCGGGGGTGAAAGTTCTTCATGGCCTTGATAAAGTTGTGGAAGGTGGGACAGTTGTTTTGACTATCAAAGATCGGCCCATACTTGCTGATGGTGATCTTAATGAAGAGGTTGATATGCTTGAGAATGTTGAAATTGGAGAACAAAAGCGGCGGGATGAGGCTTATAAAGCTGCAAAAAAGAAAACTGGCACATATGATGATAAGTTCAATGACGACCCCTCTACGGAGAAGAAAATACTTCCCCAATATGATGATCCGGCTGCAGAAGAGGGTTTGACTTTGGATGACAGAGGACGATTCTCAGGTGAAGCTGAGAAGAAACTTGAAGAGCTGCGAAGAAGGTTAACAGGTGTTTCCAGTTCCACAAATAACTTTGAAGATCTAACTTCATCTGGAAAGGTATCATCAGATTACTATACCCATGAAGAAATGCTTCAATTTAGGAAGCCCAAGAAGAAAAAATCCTTACGGAAGAAAGATAAACTGGACATCAATGCCCTTGAAGCTGAAGCTATCTCTTCAGGATTGGGTGTTGGTGACCTTGGTTCTCGGAAAGATGCAAGGAGGCAAGCCATCAAAGATGAACAAGAAAGATTGGACGCTGAGATGAGAAATAATGCTTACCAGTCTGCTTATGCTAAAGCAGATGAAGCGTCCAAATTACTGCGTCTAGAACAAACTCTCAATGTTCAAACAGAGGAAGAAGAAACTCCAGTTTTTGCAGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGCAAGAAGATTAGCTCTTAAAAAGCAGGAGGAAGAAGGAGCTTCTGGCCCTCAGGCTATTGCATTGCTTGCCACCTCAAATCATAATAATGAGACTGTAGATGATCAAAACCCAACAGCTGGAGATTCACGAGAAAACAAGGTGGTCTTCACAGAGATGGAAGAATTTGTTTGGGGTCTCCAGATTGATGAAGAAGCACGTAAGCCAGAAGGTGAAGATGTTTTCATGCATGATAATGAAGAGGAAAATGTTCCTGATGAAGAAAAGATTGACGAGGGTGGTGGATGGACTGAAGTTAAAGAAACTAATGAAGATGAACAACCCAATTCAGAAGACAAGGATGAGATAGTTCCTGATGAAACTATCCATGAAGTTGCTGTAGGGAAAGGATTGTCAGGTGCATTGAAACTACTTAAAGAGCGAGGAACACTTAAAGAAAGCATTGAATGGGGTGGAAGGAACATGGATAAGAAGAAAAGCAAATTGGTTGGGATCATAGATGATGAAGGAAATGAAGTGCAAAATAAAAAGGAGATTCGCATTGAGAGGACAGATGAATTTGGGAGAATTTTGACTCCTAAAGAAGCCTTTCGGATGATTTCTCATAAGTTCCATGGTAAAGGACCTGGCAAAATGAAGCAGGAAAAGCGTATGAAGCAATATCAAGAAGAATTAAAGATGAAGCAGATGAAGAGTTCAGATACACCATCACTGTCTGTGGAGAGAATGAGGGAAGCTCAAGCTCGTTTGAAGACACCCTATCTTGTTCTTAGTGGTCATGTCAAACCAGGTCAAACTAGTGACCCAAAAAGTGGTTTTGCTACTGTTGAGAAAGATCTTCCTGGAGGCTTGACACCCATGCTTGGTGATCGAAAGGTTGAGCATTTTCTGGGAATTAAGAGGAAAGCTGAACCATCAAGCTCGGATACGCCAAAAAAGGCTAAATCTTGA 2664 0.4245 MDVEWSESRYESRKDEEDSPVREQYDDDGAEKSSKHRSKDRKKSDKEHRSKDREQLKRAAEDVEKDRVAGRDRKKEDRDEREKDRSKDGKAREKDYDREKYREKERERDRDKKDRGKDRDREKERETEKDSDRARDKERGKEKTRDRDRDKDRERHRDREKERESFKDGDKDKGKDKVREKERETDRDKERSKDRVSRKTHEEDYELSNVDDKVDYREKRDEEVGKQGKTSKLNEDDQDGETSAPMSSIVLEERILKMKEARTKKQPEAASEISAWVNKSRKLEKERALQLSKIFEEQDNIAVEGSDDEDTTHHTDNLAGVKVLHGLDKVVEGGTVVLTIKDRPILADGDLNEEVDMLENVEIGEQKRRDEAYKAAKKKTGTYDDKFNDDPSTEKKILPQYDDPAAEEGLTLDDRGRFSGEAEKKLEELRRRLTGVSSSTNNFEDLTSSGKVSSDYYTHEEMLQFRKPKKKKSLRKKDKLDINALEAEAISSGLGVGDLGSRKDARRQAIKDEQERLDAEMRNNAYQSAYAKADEASKLLRLEQTLNVQTEEEETPVFADDDEDLRKSLEKARRLALKKQEEEGASGPQAIALLATSNHNNETVDDQNPTAGDSRENKVVFTEMEEFVWGLQIDEEARKPEGEDVFMHDNEEENVPDEEKIDEGGGWTEVKETNEDEQPNSEDKDEIVPDETIHEVAVGKGLSGALKLLKERGTLKESIEWGGRNMDKKKSKLVGIIDDEGNEVQNKKEIRIERTDEFGRILTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKMKQMKSSDTPSLSVERMREAQARLKTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSSDTPKKAKS. 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09665 887 MobiDBLite consensus disorder prediction 591 614 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 774 813 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 1 239 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 374 417 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 1 251 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 647 690 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 864 887 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 782 801 - -
Seca4g09665 887 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 143 849 IPR005011 GO:0000398
Seca4g09665 887 MobiDBLite consensus disorder prediction 828 887 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 660 678 - -
Seca4g09665 887 MobiDBLite consensus disorder prediction 576 614 - -
Seca4g09665 887 Pfam SART-1 family 269 721 IPR005011 GO:0000398
Seca4g09665 887 Pfam SART-1 family 745 795 IPR005011 GO:0000398
Seca4g09665 887 Coils Coil 782 802 - -
Seca4g09665 887 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09665 Seca-Chr4 227360630 227387352 Dispersed/Wgd