Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09640 ATGGCTTTCAGGCCAAGAACTCCAACTTTCCGGCCCCAACTTTCCGTTCGTCGTGTGTACGTGACTTTGCAGCCTCGATCAGAGATGAAAGAAACCCCAGATGCTCACCTTCTTCATGTTTATCTTCCTGGTTATACAAAGGATCGTATAAAGATTACATTTGTGGGCTCTTCACGAATGGTGAGGATTACAGGTGAACGACCAATTGAAGGTAATAGATGGAGCCGATTTGACCAAACATATCCTGTTCCTGAAAATAGTGAGGCAGAGACACTTCAAGGCAACTTTGAACTTGGAACTCTCATCCTCAAAATGCCAAAAAAGATCATTTCACAAGTTACTCCTAAACCTGAAGTTGAAACAACCCAACAAAAAAGCCCAACACCAACAAGTCCTTCAGAGAAAGCTGTAGCTGAAGACAAGCCTGATAAGGCCCCAGAGACCATTCCACCACAATCTACTGAAGTGGAAGCCAAGCCTGAAAAGGCCCAAGAAACAGTTCCATCACAACCTCAAATTACTAAAGTGGAAGAACCAACTGAAGACAAGAAAAGTGCTTCACTAACAAGCCCTGTAAAAGGCCCTGCTGACTTTAAGGCACAAAACGCTACTCAGGAAGACACATCATCTCAAATCACTTCAGAACCAATTAAGGATCATAGCCCTCAAAAGGGTCAAGAGGAAGCTGTAGCAAAACATACAGTAACAGGTAAGCCCCAAGAGGGTCAAAAGGAATTTGAGGCAAAACCAACACCAACAAAGGTAACCAAAATCCAAACAGATGAACCAAAGGGTCAAGAGCAAGTTGAGCCAAAACCAACATTAACAACAATTACTAGAGATCCAGCAGAAGAAATTAGGCTGAAGCCTGGACTAACAACAATCAAAGAGCCATTAGAGGAAAAGAAATTGGGAATGAGTGCTGAAGATGCTGAGAAGGAAAGGATCTCAAAGAAGGAAGTTAAAGAGGAAGATGGAAAGCCTTCTGAGTCAAGAAAGCCTGATGTGGAGAAGGGAAACTTGCAAGGAAAGGAAATTAAGACAAGAAAATTGTCAGCTAAGGAAGCAGAACCTTCTGCTCCAAAAGTTCCAGAAAAGAAAAAGGAATCTAGCAGCAGAGCTTCTCCTAACCTGGAAGGGAAGAATGGAGAGGATATGATTGATGTTGTAGGGAATGGAATCAGAAAATTGGCTACTTCTTCTTCTCAGGTTGTTGCAAGAATAGCAGAAGGGAAATGGAATGAAGAAGAGAAACAATTGATTGCAAATATAGGTGCTGCAGTTCTAGTAATTGCTGCATTGGGAGCTTATGTATCCTGTAGGTTTGCCTCTTGA 1335 0.4225 MAFRPRTPTFRPQLSVRRVYVTLQPRSEMKETPDAHLLHVYLPGYTKDRIKITFVGSSRMVRITGERPIEGNRWSRFDQTYPVPENSEAETLQGNFELGTLILKMPKKIISQVTPKPEVETTQQKSPTPTSPSEKAVAEDKPDKAPETIPPQSTEVEAKPEKAQETVPSQPQITKVEEPTEDKKSASLTSPVKGPADFKAQNATQEDTSSQITSEPIKDHSPQKGQEEAVAKHTVTGKPQEGQKEFEAKPTPTKVTKIQTDEPKGQEQVEPKPTLTTITRDPAEEIRLKPGLTTIKEPLEEKKLGMSAEDAEKERISKKEVKEEDGKPSESRKPDVEKGNLQGKEIKTRKLSAKEAEPSAPKVPEKKKESSSRASPNLEGKNGEDMIDVVGNGIRKLATSSSQVVARIAEGKWNEEEKQLIANIGAAVLVIAALGAYVSCRFAS. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09640 444 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 122 IPR002068 -
Seca4g09640 444 SUPERFAMILY HSP20-like chaperones 18 108 IPR008978 -
Seca4g09640 444 MobiDBLite consensus disorder prediction 115 133 - -
Seca4g09640 444 Pfam Hsp20/alpha crystallin family 29 110 IPR002068 -
Seca4g09640 444 MobiDBLite consensus disorder prediction 201 219 - -
Seca4g09640 444 CDD ACD_sHsps-like 28 107 - -
Seca4g09640 444 Gene3D - 11 110 IPR008978 -
Seca4g09640 444 MobiDBLite consensus disorder prediction 282 374 - -
Seca4g09640 444 MobiDBLite consensus disorder prediction 113 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09640 Seca-Chr4 226940239 226943018 Wgd