Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09628 ATGCTGCACTCTGAATATTTAAGTACTCTTAACTCCCAATCTCTCTCACTTCAATTCAACCACTTACCATCACTCTCCCCACCCATTTCATCAACACTACACAAAATGTTCTACCACAACACAAGAGCCCTGGCACAATTGCTATTGCTAGCATCAATGATGGCTGGCAGTGCCATGGCAGATTTAACCAAGGACAAAGCAGAATGCACAGAGCAATTGACAGCTCTAGCAACATGCCTGCTTTATGTTGAGGGTGAAGCAAAAACTCCAGCACCAGATTGTTGTAGCGGTCTCAAACAAGTGCTCAAGAACAACAAGAAGTGTTTGTGTCTTGTTATCCAAGATCGCAATGATCCAGACCTCGGTGGTATACAGATTAATGTGACTTTAGCTTTGGGCTTGCCAACAATTTGCAATGCCCCTGCCAATGTCTCCAAGTGCCCTGAGCTGCTGAACATGGATCCCAAATCACCAGAGGCTCAAATTTTTTATCAATTGAACAAAGGCTCCAGCAAAAGTGCCACAAGTCCTGCACCTAGTCCTTCTGTTAGAGCAAGTTCTTCAAGCAGCCAGGCAACAAGTGTGACACAAAAGAGTGATGCATTCTGCATGGAGAAGAGATTGATTGGGTTGGATGGTTTGGCCCTAGGGCTTCTTGTTTGGATTTTATTTGACTAA 678 0.4425 MLHSEYLSTLNSQSLSLQFNHLPSLSPPISSTLHKMFYHNTRALAQLLLLASMMAGSAMADLTKDKAECTEQLTALATCLLYVEGEAKTPAPDCCSGLKQVLKNNKKCLCLVIQDRNDPDLGGIQINVTLALGLPTICNAPANVSKCPELLNMDPKSPEAQIFYQLNKGSSKSATSPAPSPSVRASSSSSQATSVTQKSDAFCMEKRLIGLDGLALGLLVWILFD. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09628 225 Pfam Probable lipid transfer 52 147 IPR016140 -
Seca4g09628 225 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 68 148 IPR036312 -
Seca4g09628 225 CDD AAI_LTSS 76 139 - -
Seca4g09628 225 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 49 188 IPR043325 -
Seca4g09628 225 SMART aai_6 69 147 IPR016140 -
Seca4g09628 225 Gene3D - 66 147 IPR036312 -
Seca4g09628 225 MobiDBLite consensus disorder prediction 170 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09628 Seca-Chr4 226772497 226774199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09628 43 224 Acyl Lipid Metabolism Gene Families AT2G44290 46.392 3.04e-60 186