Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08956 ATGGGTGAAATCGAAGAAATTGGAGCTGATGTTTGTTCGGATATAGATGTTGATGACATTAGATGCCACAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGAGGCGGATGTGGAAGGATCGCATCAAGCTCAAAAGGCTCAAGGAAAAACAGAAGCTTGCAGCACAGCAAGCTGCAGAGAAGCAAAAGCCCAGGCAGTCCACTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAGAAGGGAAAACCAGTTAGTGGCTCCTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCGGAGTGTCTTGCTATGAGCGAGGCTGATAATAATAGAAATGGGAATTCTCAAAGCAGTCTCCAAGACTTGCAAGATGCAACACTTGGGTCTCTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCCTTAGAAAAGGGTATTCCCCCACCTTGGTGGCCAACTGGGAATGAAGATTGGTGGTTACATTTGAATTTACCTCGTGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTGACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCATGTCCGCCAATCGAAATGCTTGCAAGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCGTGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGATAATGGTACATCTGGAATAACTGAAATGCCGCCTGGTGTTCCTGTTGAGAATAAGCAAGCTGCTGCTAGTAGTGCTAGCAACTATGATGTTGATGGTGCTGATGATGGCATTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAGTCTATGGATGTTGAACCATCAGATAACTCGCGCAGGAATTCTGTCCAAGATACAGATCAAGCTAAGAAGCAACCCAGGAAAAAGAGACCGCGTTTGAGGTCAAGCGCAACTGACAAACTACCAGCACAATCTGACAATGAAATTTTACATGTTGAGCCTAGAAGCAAAATACCCAATATGAACCAGACAGAAGCGCAGGTAGTTGGACTCCAAATTCATGGAAATGAACAGGGCAATGAGACAGATTCTGCTTTGAGACCACTGGAAAAGGGACCTGAGGTGCCAGCTCAACTACCAGCACCGGAGTTTGATCATTATTCTTATCTGCATGCAAACAACTTGATTTCCTCAGAAAGCATGTATATGAGTGGAAGGCCATTGCACTATCCTGAGATGCAAAATCCTGACATACATCATGAAACTACTTACAATCTTTATAATCCAGTGGCAGGATATGGGCCTAGTCAGGATGGGCAACAGCTACAGTCTGGGAACAGTGAACCAATCAGGCCGGAGAATGATGCAGTCTCTATGCCAGCAGTACATATGAAAGGGGATGAAATTACTGGAGGAGACTTGAATTACTTTGGTAAAGACACATTTCCAAATGACCTTGATAGGCCTATAGATCACTCTTTCTTTGGATCACCAATCAGTAGCATGTCATTAGATTTCGGAGGACTTAACAGTCCATCATTCCATTTAGATGATTTCTTGGGCGATGATGAAATGATCCAGTACTTTGGAGCATAG 1782 0.4321 MGEIEEIGADVCSDIDVDDIRCHNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKEKQKLAAQQAAEKQKPRQSTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNNRNGNSQSSLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWLHLNLPRGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGITEMPPGVPVENKQAAASSASNYDVDGADDGIGSVSSKEDRRNQSMDVEPSDNSRRNSVQDTDQAKKQPRKKRPRLRSSATDKLPAQSDNEILHVEPRSKIPNMNQTEAQVVGLQIHGNEQGNETDSALRPLEKGPEVPAQLPAPEFDHYSYLHANNLISSESMYMSGRPLHYPEMQNPDIHHETTYNLYNPVAGYGPSQDGQQLQSGNSEPIRPENDAVSMPAVHMKGDEITGGDLNYFGKDTFPNDLDRPIDHSFFGSPISSMSLDFGGLNSPSFHLDDFLGDDEMIQYFGA. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08956 593 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Seca4g08956 593 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Seca4g08956 593 MobiDBLite consensus disorder prediction 60 83 - -
Seca4g08956 593 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Seca4g08956 593 Pfam Ethylene insensitive 3 38 285 IPR047091 GO:0003700
Seca4g08956 593 FunFam Ethylene insensitive 3-like 1 159 295 - -
Seca4g08956 593 FunFam Ethylene insensitive 3-like 1 72 150 - -
Seca4g08956 593 MobiDBLite consensus disorder prediction 288 403 - -
Seca4g08956 593 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 580 IPR006957 GO:0003700|GO:0005634
Seca4g08956 593 MobiDBLite consensus disorder prediction 332 367 - -
Seca4g08956 593 Coils Coil 23 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08956 Seca-Chr4 213388509 213393349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08956 18 593 EIL Transcription Factor Family AT1G73730 54.266 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca4g08956 EIN3 1.4e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08956 4 213388509 213393349 Seca4g08956 4 213388509 213393349 ECH