Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08317 ATGATGGATAAAATAGGGTGGAGTTTCAAGAGATTCAGAACATTATTGATTGTGGGTTCCATAACCTTCCCTATTTTAGTCACATTTTATCTGATGCACCAAAACTCAATCTTTGACCTTGTTGAGGGATTTTCCAAGATTGACATTTTAGCTGGAAGGGCCCAGAATGCTACAACTGATGTCTTAAAACAAGAGGCTCAGAATATTACAGTTAAAGCTGGGGGAGGAAAAGAACAGAATATTACAGAGTCAGTGGTAGATAAGGTGTTGGCAGACAAAGATCAAAATAGTATACCTGGGATCTCCCAAGATCAAGCTCAGACACAAACAATCTCAGATATTGGTCCGAAGAATCAATCTTTTGAAGACCAGAGAAATGATTCATCCCTATCTACTACTAGCATTGCTAATGACCAACTCCTTGACGGACTTCTAGTTTTTACATTTGATAAAGCATCATGCTTAAGTAGGTATCAATCTCACTCATATCGCAAAGCTTCCCCTCATAAACCTTCGGCATATCTGATATCCAAGCTACGCAACTATGAACATCTTCATAAAAGTTGTGGACCTCATACCAAATTCTACAGCAAAATCATGAGCAAGGATGCAAAATTGAGCAAAAAGGATGCAGGTACAAAGTGCAAATACCTTGTCTGGACAGCTTCCAATAGCTTAGGGAACAGGATGTTAACCTTGACAGCAGCATTCCTTTATGCTATCCTCACAGACCGCGTTCTACTTGTCAAATTTGGAACTGATATGCTTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGCTACTGCCCAGGAGTTTTCCTTATTGGAAAGATCAGAAACATATTGAAACGTATGAAAGCATGCTAGTAAGTAACAAGACAAACATTTCACAGGAGCTTTTACCACGATTTCTTATTCTTAATCTACAACACACCCATGATGGTCATAATAACTTTTTTCATTGTGATCATAGTCAAGGTCTTCTCCAGAAATTTCCCGTCCTAATTTTGTGGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCACCATTTAGACAAGAACTAAGCAAAATGTTCCCTGAGAAAGATACTGTTTTTCACCATCTGGGACGTTACCTTTTTCATCCATCAAATGAGGCTTGGGAACTGATTAGCAGGTTCTATGAGGCACACTTAGCCAAGGCAAATGAGAGGATTGGCCTGCAGATTAGAGTATTTAATACTCACAGAGCACCACATCAAACCATAGTCAATGAAATTATAGCCTGCACCCTTAAGCATAAGCTGCTGCCTGAATTAGACATGAAAAAGTCTGCAAGTTCTCCATTGAAGAAGGAGACATCAAAAGCTATTCTAGTAGCATCTTTATACAAAGAATATGGTGAGAAGCTGAGGGCTATGTATCTGAAAAATACAACTGTTACCAGGGAGGTGATAAAAGTTTATCAGCCAAGTCATGAGGAGCGCCAAAAGTCAAATAATGATATGCACAATATCAAGGCATGGACAGAAATATATTTGCTGAGTTTGTGTGATGCATTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCAAAGTCTTGGAGGTTTGAAGCCATGGGTTCTGCACAGAGCATATGGGGAAGCCGTCCCAAATCCACCTTGTCAACGAGTCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGATTGTAGAGCCAATAGATCAGTTGATTTTACTTCCCTCTTTCATTACATGAAGCATTGTGAAGATGTAACTAGTGGATTGAGGCTGGTTAATGCTAATCGCTAG 1812 0.3957 MMDKIGWSFKRFRTLLIVGSITFPILVTFYLMHQNSIFDLVEGFSKIDILAGRAQNATTDVLKQEAQNITVKAGGGKEQNITESVVDKVLADKDQNSIPGISQDQAQTQTISDIGPKNQSFEDQRNDSSLSTTSIANDQLLDGLLVFTFDKASCLSRYQSHSYRKASPHKPSAYLISKLRNYEHLHKSCGPHTKFYSKIMSKDAKLSKKDAGTKCKYLVWTASNSLGNRMLTLTAAFLYAILTDRVLLVKFGTDMLGLFCEPFPDSSWLLPRSFPYWKDQKHIETYESMLVSNKTNISQELLPRFLILNLQHTHDGHNNFFHCDHSQGLLQKFPVLILWSDQYFVPSLFMIPPFRQELSKMFPEKDTVFHHLGRYLFHPSNEAWELISRFYEAHLAKANERIGLQIRVFNTHRAPHQTIVNEIIACTLKHKLLPELDMKKSASSPLKKETSKAILVASLYKEYGEKLRAMYLKNTTVTREVIKVYQPSHEERQKSNNDMHNIKAWTEIYLLSLCDALITSPKSTFGYVAQSLGGLKPWVLHRAYGEAVPNPPCQRVKSMEPCFHYPPKYDCRANRSVDFTSLFHYMKHCEDVTSGLRLVNANR. 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08317 603 Gene3D - 384 538 - -
Seca4g08317 603 Gene3D - 212 263 - -
Seca4g08317 603 FunFam Galactoside 2-alpha-L-fucosyltransferase 213 264 - -
Seca4g08317 603 PANTHER FUCOSYLTRANSFERASE 2-RELATED 58 600 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca4g08317 603 FunFam Galactoside 2-alpha-L-fucosyltransferase 385 539 - -
Seca4g08317 603 Pfam Xyloglucan fucosyltransferase 133 572 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08317 Seca-Chr4 197574610 197584468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08317 131 599 Xyloglucan Fucosyltransferase1 AT2G03220 51.266 6.75e-166 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08317 K13681 - gmx:100799776 900.197