Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07990 ATGGATGGATTTGGTGCTGGGGCTGATGTTCCCGGTGCTCCCAACACCGAAGATCTTAAGCAATTGGAGCATGTTTCCAAAGAAGGGGCAGTATTTGATGCATCACAATATGCATTCTTTGGTAAAGGTGTTGCTGAGGAAGTTGAGTTAGGGGGGTTAGAGGATGGAGATGACTTTATTCCTGCTGTTGACTTAACTGATGAGGAGTTTTTTCTCAATAGAGAAGAGGTGGAGGATGTAAGATCTCTTTCCGATATTGATGATCTCACTACCACCTTTTTAAAGTTGAACAAAGTTGTTAGTGGACCGAAAAGCGCAGGAGTTATTGGTGATCGGGCATCAAGAGAAAATTCCTCTGCTTCTGAGTGGTCACAAAGGGATGATTTTTCCTACTGGGTTGACCAGCACACTTATGACAGTGAAAGTTCTCAGGATGGCAAAAGATGGTCATCGCATCCTCATTCTTCTCTCACTCATCTACAAGAACCAAAGCCCTTGTACAGAACATCTTCATATCCTGAGCAACAACGGCAGCAGCAACACCACCTTCAACATCGCTCTAGTGAACCTGTTGCTAACTGGTTTGATCAGCATTTTTATGATAATGAAACTGCTGAGGATGGAAAGAGATGGTCATCACAGCCACATTCCTCCATAGTGCACTTACAAGAATCAAAGCCCTTGTATAGAACATCTTCATATCCTGACAAGCGACTGGACCTTCCTCGTTTTTCTAGTGAACCGATTTTGGTACCAAAATCTTCATTTACTTCTTATCCTCCGCCTGGTGGTAGGTCCCAACAGTCTTCTCCAAACAATAGTACAGGCCACTTGAACATTCCTTATCATGATGGGGGAGCTCATATGGCATTATCATCACAAAATTGTTCCCATTTCAATTCTGTGCTACAGTTGAGTGGATCAAAAAATGAGTCACATTTTAGTGGAAATGTGCGCCGATTTACTACTGGCTCCCCTCTTAATCATCTAGTCCAGAATCAATGGGTCAACCATACAGGGGTATATCCTGGAGATCATCCAAACCTGAATAATATGTTGCAGCAACAATTACACCATCATAATGGATCAGTGTCTCCTCATATACTGACTCAATTGCAGCAACAGCAGCATAGACTGCATCATCCTATTCAGCAATCAGCAGGCTACATGTCAGGTTTCCAGTCCCATTTATTTAATCCCCATCTTTCTTCTGGACCGTCCTTAGTTAGCAAATATGAACATATGCTTGGTCTGGGTGATTTTAGAGAGCATAGACCAAAATCTACTCATAAGGGTAGACAGAGTCATCGCTTCTCCCAACAGGGTTCTGATGCTGGTAGCCAAAAGAGTGATAGTGGTTCGTTACAGTTTAGATCCAAGTATATGACTAGTGATGAAATTGAGAGTATTCTTAAAATGCAGCTTGCTGTGACTCATTGTAATAACCCCTATGTAGATGACTATTATCACCAAGCTTGTCTTGCAAAAAAAGCTGGGGCTAAGTTGGCACAATCATTTTGCCCAACCCAAATAAAAGAACTCCCTACACGAGCCCGTTCCAATTCTGAGCCACATGGTTTTCTTCAGGTTGATGCTTTAGGGAGGGTTTCATTCTTGGGTATACGTCGGCCTCGCCCTCTTCTTGAAGTTGATTCTCCAAACTCTTCCTCTAGTGGTAACTCCGAGCGAAATATTTCAGAGAAGCCCCTTGAAAAGGAGCCTTTGTTTGCAGCCAGAGTCACAATTGAGGATGGTCTTTGTCTTCTTCTAGATGTTGATGATGTTGATCGTTTCCTTCAGCGTAATCAGCTGCAAGATGGTGGAACTCAATTAAGACGAAGACGGAAGGCCCTTTTGGAAGGACTAGCAACATCACTTCAACTTGTTGACCCACTGGGAGTGGGAAAGAATGGACACAAAGTTGGGCTTGCTGCTAAGGATGATGTTGTTTTCTTGCGATTAGCATCTCTTCCCAAGGGGCGTAAGCTCCTAGCAAAGTATCTTCAGTTGCTTGTTGCTGGTAGTGAGCTTATGCGGATAGTCTGCATGGCTATATTTCGTCATTTAAGATTCTTATTTGGTGGTCTTCCCTCTGATTCGGCAGCTGCAGAGACTACAAGTCACCTTGCTATGGTTGTTTGTCAATGTGTCCAAGGAATGGATCTTAGTGCTCTTGGTGCCTGTCTTGCAGCAGTGGTTTGTTCATCAGAGCAGCCTCCTCTTCGCCCCATTGGAAGCACTGCAGGAGATGGTGCTTCCCTTATTTTAGTATCTGTTCTTGAGAGGGCTACTGAACTTCTAACTGATCCTCATGCTGCTTGCAACTATATTGGTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTTTTCGGCCTTCTCACGAAGTGTTGCATGAATAAATACCATAGCATCATGCAATCCCTGCTTGTTCAAGGGGCACCAAATATGGCTGTAGTTGGATCTGATGCTGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCTTACGTGCAAGTCTTCCTCACACCAATGACCACCAGAGGAAGTTATTACTAGATTTTGCTCAGCGCTCTGTGCCTGTGGTTGGATTTAACAGTTATGCTGGGAGCAGTGGCAGTCATGAGAATGTGAACTCAGAGACAGTGCTAAGTTGA 2658 0.436 MDGFGAGADVPGAPNTEDLKQLEHVSKEGAVFDASQYAFFGKGVAEEVELGGLEDGDDFIPAVDLTDEEFFLNREEVEDVRSLSDIDDLTTTFLKLNKVVSGPKSAGVIGDRASRENSSASEWSQRDDFSYWVDQHTYDSESSQDGKRWSSHPHSSLTHLQEPKPLYRTSSYPEQQRQQQHHLQHRSSEPVANWFDQHFYDNETAEDGKRWSSQPHSSIVHLQESKPLYRTSSYPDKRLDLPRFSSEPILVPKSSFTSYPPPGGRSQQSSPNNSTGHLNIPYHDGGAHMALSSQNCSHFNSVLQLSGSKNESHFSGNVRRFTTGSPLNHLVQNQWVNHTGVYPGDHPNLNNMLQQQLHHHNGSVSPHILTQLQQQQHRLHHPIQQSAGYMSGFQSHLFNPHLSSGPSLVSKYEHMLGLGDFREHRPKSTHKGRQSHRFSQQGSDAGSQKSDSGSLQFRSKYMTSDEIESILKMQLAVTHCNNPYVDDYYHQACLAKKAGAKLAQSFCPTQIKELPTRARSNSEPHGFLQVDALGRVSFLGIRRPRPLLEVDSPNSSSSGNSERNISEKPLEKEPLFAARVTIEDGLCLLLDVDDVDRFLQRNQLQDGGTQLRRRRKALLEGLATSLQLVDPLGVGKNGHKVGLAAKDDVVFLRLASLPKGRKLLAKYLQLLVAGSELMRIVCMAIFRHLRFLFGGLPSDSAAAETTSHLAMVVCQCVQGMDLSALGACLAAVVCSSEQPPLRPIGSTAGDGASLILVSVLERATELLTDPHAACNYIGNRSFWQASFDEFFGLLTKCCMNKYHSIMQSLLVQGAPNMAVVGSDAAKAISKEMPVELLRASLPHTNDHQRKLLLDFAQRSVPVVGFNSYAGSSGSHENVNSETVLS. 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07990 885 MobiDBLite consensus disorder prediction 550 564 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 435 455 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 251 279 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 422 455 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 149 163 - -
Seca4g07990 885 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 187 865 IPR039900 GO:0000290
Seca4g07990 885 MobiDBLite consensus disorder prediction 549 568 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 205 224 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 259 279 - -
Seca4g07990 885 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07990 Seca-Chr4 186244396 186255807 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07990 4 186244396 186255807 Seca4g07990 4 186244396 186255807 ECH