Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07954 ATGCAGGCTATTAATAGTTTGAAGAATGTTGATTCCACTGCTTTACTTCAGTTTCTTCACCCAATCCTTAATATGCTGCTTCATCTTATTGGCAATGGCGGAGAAACACTCCAGGTTGCAGCTTTCCGTGCTATGGTTAATATTGTAACCAGGGTGCAGCAGGAATCAGTTGATGATGCTGAAAGAAATCATTTTCTAATCAACTATGTTGATTGTGCTTTTGATGATTTTGGTGGTCGCCAACCACCAGTATATCCTGGATTATCCACTGTCTGGGGAAGCCTGGCACGAAGTAAGGCTAAAGGGTATCGTGTTGGACCGGTGTATGATGATGTTTTGGCAATGGCATGGTTTTTTCTGGAGCTAATTGTTAAATCAATGGCATTGGAGAAGACTCGTCTCTTCTATCATAGTCTTCCAATAGGTGAAGATATCCCACCAATGCAGTTGAAGGATGGTGTATTCAGATGTATAATGCAGTTGTATGATTGCCTTCTAACTGAGGTGCACGAACGCTGCAAGAAGGGTTTAAGCTTGGCAAAGCGCTTGAACAGTAGTTTAGCCTTCTTTTGTTATGATCTTCTATCCATTATTGAGCCACGACAAGTTTTTGAGTTGGTATCATTATATCTTGATAAGTTCTCTGGCGTATGTCAATCAGTTCTTCATGAGTGCAAACTTACCTTTTTACAAATAATATGCGACCACGATCTTTTTGTTGAAATGCCTGGGAGAGACCCTTCAGATAGGAACTACCTCTCATCTGTATTGATACAAGAACTCTTTGTTACATGGGATCATGAAGATTTGTCTCTACGAGCAAAGGCAGCAAGAATCTTGGTAGTGCTCTTGTGCAAGCATGAGTTTGATGTGAGATACCAGAAGCCTGAAGATAAGTTGTATATTGCTCAGCTATATTTCCCACTAATTGGACAGATATTGGATGAAATGCCTGTTTTCTACAACCTGAATTCTGTCGAAAAGCGGGAAGTTTCTATTGTAATTCTGCAAATAGTTCGAAACCTTGATGATGCATCACTTGTCAAGGCATGGCAGCAAAACATTGCCCGGACTAGATTGTTTTTCAAGCTCATGGAGGAGTGCTTAATTCTATTTGAGGTTACACTTAATACACACAAAAAACCTGCTGATGGCATGTTACTTGGCTCCAGTTCTCGCAATCCTGTAGGGGAGGCACCCGCATCCCCCAAGTACTCTGATAGACTTTCTCCTGCAATCAACAACTATCTATCTGAGGCCTCAAGGCAGGAAGTCAGGCCTCAGGGAACCCCTGATAATGGATATTTATGGCAGAGAGTAAATTCCCAATTAAGTTCTCCTAGCCAGCCATATTCCTTGAGAGAAGCTCTAGCTCAAGCACAGTCTTCTCGGATTGGAGCTTCTGCTCAAGCACTTCGAGAATCTCTACACCCACTTTTGAGGCAGAAATTGGAACTGTGGGAGGAAAATTTGAGTGCTTCTGTCAGTCTTCAGGTTTTGGAGGTGACTGAGAAATTCTCCATGATGGCGGCATCGCACAACATTACTACTGATTATGGAAAACTTGATTGCATCACAGCTGTATTCATGAGCTTTTTATCCAGAAATCAGCCATTAACTTTTTGGAAAGCATTTTTTCCTGTATTTAACAGTGTGTTTGATTTACATGGGGCAACTTTGATGGCAAGGGAAAATGATCGTTTTCTAAAGCAAGTCACTTTCCATCTCCTTCGGCTTGCCGTTTTCCGAAATGAAAACATCAGGCAAAGAGCAGTTGTCGGGCTTCAAATACTTGTGAGGTGTTCATTTCATTACTTTGTTCAAACTGCAAGGTTAAGAGTCATGTTGATTATCACTTTATCAGAGCTAATGTCTGATGTGCAAGTGACACAAATGAGATCCGATGGAAGCCTAGAAGAGAGTGGTGAAGCACGTCGGCTTAGAAAATCTTTAGAAGAAATGAAGGATGAAACTAAAAGTGCTTTCCTTTTGAAGGAGTGTGGATTACTTGAGAGTGCTCTTGTGGCCATATCAGAAAAAATGACAGAAAATCGGTGGTCCTGGTCAGATGTGAAATATCTCTCTGACAGTCTTATTTTGGCCCTTGATGCTAGCTTGGAGCATGCACTATTGTCCCCCGTGATGACTATGGATAGATATGCTGCTGCTGAAAGTTTTTATAAACTGGCCATGGCATTTGCTCCAGTCCCTGATCTTCACATAATGTGGTTACTTCATCTATGTGATGCACATCAAGAAATGCAGTCATGGGCTGAAGCTGCTCAGTGTGCTGTTGCTGTTGCTGGTGTGGTAATGCAGGCCCTTGTCGCCAGAAATGATGGTGTTTGGAGCAAAGACCATGTCGCTGCTTTACGTAAGATTTGTCCTATGGTCAGCAGTGAGATCACATCTGAAGCATCTGCTGCAGAAGTAGAGGGATATGGTGCTTCAAAACTGACAGTTGACTCTGCTGTGAAATACCTGCAGCTTGCTAATAAGCTCTTCTCACAAGCTGAGCTTTTTCATTTCTGTGCAAGCATTCTAGAACTTGTAATCCCAGTTTACAAAAGCAGGAGGGCTTATGGACAGCTGGCTAAATGTCACACGCTACTTACTAATATCTATGAGTCAATACTTGAACAGGAATCTAGTCCGATTCCTTTCACTGATGCTACATACTACAGGGTTGGATTTTATGGTGATAGATTTGGGAAACTTGACAAAAAGGAGTATGTATATCGTGAGCCTCGTGATGTACGACTAGGTGACATAATGGAAAAACTTAGTCACATATACGAGACTAGAATGGATGGTAATCACACTTTACATATTATTCCAGATTCTAGACAAGTGAAGGCAGAGGAGTTACAACCTGGTGTATGCTACCTTCAGATTACAGCTGTTGATCCAGTCATGGAAGATGAAGATTTAGGAAGTAGAAGAGAGAGAATTTTCTCTCTTTCTACTGGAAGTGTTCGTGCTCGTGTATTTGACCGTTTCTTGTTTGATACCCCATTTACAAAAAATGGCAAGACTCAAGGTGGATTGGAAGATCAGTGGAAGAGACGCACTGTCCTTCAGACCGAGGGTTCATTTCCCGCTTTAGTAAATAGGCTATTGGTAATCAAATCGGAGTCCCTTGAATTTTCTCCTGTAGAAAATGCAATTGGAATGATTGAAACACGAACAGCTGCATTAAGAAATGAGCTTGAAGAGCCTCGAAGTTCTGAGGGGGATCAACTTCCACGACTCCAGAGTCTACAAAGAATCCTCCAAGGCAGTGTTGCAGTACAAGTAAACAGTGGAGTTTTGAGTGTTTGCACAGCCTTCTTGTCAGGCGAGCCTGCGACAAGGTTGCGATCACAAGAACTGCAGCAACTAATAGCTGCCCTTCTTGAGTTCATGGCTGTTTGTAAACGTGCCATTCGGGTACATTTCAGATTGATTGGTGAGGAAGATCAGGATTTCCATACTCAACTTGTAAATGGATTCCAGTCTCTGACAGCAGAATTATCGCATTACATTCCTGCCATTCTCTCAGAGCTATAA 3549 0.4198 MQAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLINYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHECKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNSVEKREVSIVILQIVRNLDDASLVKAWQQNIARTRLFFKLMEECLILFEVTLNTHKKPADGMLLGSSSRNPVGEAPASPKYSDRLSPAINNYLSEASRQEVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLELWEENLSASVSLQVLEVTEKFSMMAASHNITTDYGKLDCITAVFMSFLSRNQPLTFWKAFFPVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNENIRQRAVVGLQILVRCSFHYFVQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLEEMKDETKSAFLLKECGLLESALVAISEKMTENRWSWSDVKYLSDSLILALDASLEHALLSPVMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVAALRKICPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDKKEYVYREPRDVRLGDIMEKLSHIYETRMDGNHTLHIIPDSRQVKAEELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL. 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07954 1182 ProSiteProfiles DOCKER domain profile. 731 1180 IPR027357 -
Seca4g07954 1182 CDD DHR2_DOCK 738 1171 - -
Seca4g07954 1182 Pfam DHR-2, Lobe A 727 880 IPR046769 -
Seca4g07954 1182 Pfam DHR-2, Lobe C 1077 1174 IPR046773 -
Seca4g07954 1182 SUPERFAMILY ARM repeat 14 600 IPR016024 -
Seca4g07954 1182 PANTHER DEDICATOR OF CYTOKINESIS DOCK 2 1176 IPR026791 GO:0005085|GO:0007264
Seca4g07954 1182 Pfam DHR-2, Lobe B 948 1030 IPR046770 -
Seca4g07954 1182 Gene3D - 1050 1177 IPR043162 -
Seca4g07954 1182 Gene3D - 732 885 IPR043161 -
Seca4g07954 1182 FunFam Guanine nucleotide exchange factor SPIKE 1 1050 1177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07954 Seca-Chr4 185360260 185380078 Transposed