Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07621 ATGGTTAATGCTACTGCTACTGCTGCTGCTGACTCTGACTCTTCACCGGGAGAAGACTCTAATGCAATATATGCAAAACAAGTAAAAAATGTAACTATTGAGGAACTTGAGGCAAGGATATGGAAGGATCGTTTGCTGTTGAAGAAGCTTAAGGATGAAAGGAATCAGAAAGACAGAAAAACTTCAGTGGAACAGTTTAAGAGGAAAACCATGGCTCGTGCACAAGATGGCATAATCAAACATATGCTGAAGATGATGGAGATTTGTGATGTTCGTGGTTTTGTGTATGGAATAATTCCTTCAAAGGGTAACCCAATGACAGGTTCCTCTGAGAATATTCGTGGTTGGTGGAAAGAAAGGGTGAAGTTTGATCGCAATGGTCCTGCTGCAATTGCAAAATATGAGAAAGAAAGTGGGAATTTCCTCAATGGGATCATGTGGAATGGAAAACAAGTTTCTCCTCATACTTTGATGGAACTCCCTGACACAATTCTTGGTTCAATTTTATCATCCCTTATGCAGCATTGTAACCCACCTCAGAGGAGGTTCCCTTTGGAAAAGGGAATTGTTCCACCTTGGTGGCCTAACGGGAATGAGGAATGGTGGCCTGAATTGGGGCTTAATAAGGATCCTGGTCCTCCTCCTTATAGGAAGCCTCATGATCTTAAGAAAGTTTGGAAGTTGTGTGTGCTTATGGCTGTGATCAAGCACATGTTCCCTAATACTGACAAGATTAGAAGCATTGTTCGTCATTCAAGGACCCTTCAAGACAAGCTCACTGCTAAGGAAACTGCTACTTGGATTGCTGTTATGAACCATCAAGAATCACTTGCTAGAAAAATGTACCCTGAAATGTTCCCTCCTCTGCCTGATCCTGCTTCTACTGGCCTCATTGAGACAACAAATGATTATAATGAAATTCAAACCATTGGTCAATGCAATCATAGTCATGGAGATGTTGTTCATTACAATGAGTCCATTGTGCCTCCAATTAACACCACCAACAATAACAACCTTGTTTTTCCATCATCATCAGATGATGCTAATAAGAAGAGAAAGGCTGAAATTTTTCAGCAATTTGATGATGATGATGATAATGATGATGATACCTGTTATAACCCTCAATGCCAACTCCATGATCTTGGGTTCATTGATAGCAATGCAAGGAACAATCACAAGCATACATTCTCAAAGACAGACAACACTATTGGAGGGTCTGAATCTCAGTTTGTTGGTGATAACAAAAATGCTGGTAATGATATGACTCTGCCTATGAGTTATTCTGGAGGAGGGGGTTATGATCTGATGGATATCTACACTTCTGGGCTTAAGATGAAGAAGAACATAGTGAGTGCTCCTTCTGTAGATAACCAAAACCTGCAGCAGACACAGATGGTGAAGAATTTCTATGGTCAAGGGGTTGGTCTTGGTGTCAATGGCTACAACAAGGACCTGAAGCAACCACAGATGGTGAAGAATTTCTATGGTCAAGGGGTTGATCTTGGTGTCAATGGCTACAACAAGGACTTGAAGCAACCACATATGGAGAAGAATTTCTATGGTCAACAAGGGGTTGGTGTCAATGGCTATAACAAGGTGCTTGATGAAGTGATAACCAACAAAAATATCTCAGTGCATGCATATAATGTGTCAACACAAATGGATCCTACTTTTGGGTTTAAGGCATCTAATTCCCAATCTAATAATGGTGATCCATTCAGCTACTCATTTCTAAACTCTCCCAAGGTGGCAACTCCCAGTTATGATTTCTCTTGGCTGTACAATTGA 1788 0.4072 MVNATATAAADSDSSPGEDSNAIYAKQVKNVTIEELEARIWKDRLLLKKLKDERNQKDRKTSVEQFKRKTMARAQDGIIKHMLKMMEICDVRGFVYGIIPSKGNPMTGSSENIRGWWKERVKFDRNGPAAIAKYEKESGNFLNGIMWNGKQVSPHTLMELPDTILGSILSSLMQHCNPPQRRFPLEKGIVPPWWPNGNEEWWPELGLNKDPGPPPYRKPHDLKKVWKLCVLMAVIKHMFPNTDKIRSIVRHSRTLQDKLTAKETATWIAVMNHQESLARKMYPEMFPPLPDPASTGLIETTNDYNEIQTIGQCNHSHGDVVHYNESIVPPINTTNNNNLVFPSSSDDANKKRKAEIFQQFDDDDDNDDDTCYNPQCQLHDLGFIDSNARNNHKHTFSKTDNTIGGSESQFVGDNKNAGNDMTLPMSYSGGGGYDLMDIYTSGLKMKKNIVSAPSVDNQNLQQTQMVKNFYGQGVGLGVNGYNKDLKQPQMVKNFYGQGVDLGVNGYNKDLKQPHMEKNFYGQQGVGVNGYNKVLDEVITNKNISVHAYNVSTQMDPTFGFKASNSQSNNGDPFSYSFLNSPKVATPSYDFSWLYN. 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07621 595 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g07621 595 SUPERFAMILY DNA-binding domain of EIN3-like 154 278 IPR023278 GO:0003700|GO:0005634
Seca4g07621 595 FunFam Ethylene insensitive 3-like 1 148 285 - -
Seca4g07621 595 Pfam Ethylene insensitive 3 34 274 IPR047091 GO:0003700
Seca4g07621 595 Gene3D - 152 285 IPR023278 GO:0003700|GO:0005634
Seca4g07621 595 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 531 IPR006957 GO:0003700|GO:0005634
Seca4g07621 595 Coils Coil 33 53 - -
Seca4g07621 595 Gene3D - 60 138 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07621 Seca-Chr4 173810507 173812294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07621 31 410 EIL Transcription Factor Family AT3G20770 48.139 1.39e-122 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca4g07621 EIN3 5.1e-106 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07621 4 173810507 173812294 Seca4g07621 4 173810507 173812294 ECH